Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC19.68■□□□□ 0.74
PCDHB1Q9Y5F3 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
PCDHB1Q9Y5F3 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHB1Q9Y5F3 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHB1Q9Y5F3 RPS2P55-201ENST00000397318 883 ntBASIC19.68■□□□□ 0.74
PCDHB1Q9Y5F3 BID-204ENST00000399767 2129 ntTSL 2 BASIC19.68■□□□□ 0.74
PCDHB1Q9Y5F3 AC107956.1-201ENST00000494359 873 ntBASIC19.68■□□□□ 0.74
PCDHB1Q9Y5F3 MAX-217ENST00000557277 728 ntTSL 3 BASIC19.68■□□□□ 0.74
PCDHB1Q9Y5F3 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC19.68■□□□□ 0.74
PCDHB1Q9Y5F3 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHB1Q9Y5F3 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC19.68■□□□□ 0.74
PCDHB1Q9Y5F3 AL023875.1-201ENST00000640777 796 ntBASIC19.68■□□□□ 0.74
PCDHB1Q9Y5F3 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.68■□□□□ 0.74
PCDHB1Q9Y5F3 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHB1Q9Y5F3 AC009237.14-201ENST00000609975 1594 ntBASIC19.68■□□□□ 0.74
PCDHB1Q9Y5F3 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHB1Q9Y5F3 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC19.68■□□□□ 0.74
PCDHB1Q9Y5F3 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHB1Q9Y5F3 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHB1Q9Y5F3 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC19.68■□□□□ 0.74
PCDHB1Q9Y5F3 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHB1Q9Y5F3 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHB1Q9Y5F3 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHB1Q9Y5F3 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHB1Q9Y5F3 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHB1Q9Y5F3 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHB1Q9Y5F3 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHB1Q9Y5F3 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHB1Q9Y5F3 AP001271.2-201ENST00000624018 1556 ntBASIC19.67■□□□□ 0.74
PCDHB1Q9Y5F3 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHB1Q9Y5F3 GGT1-206ENST00000404223 952 ntTSL 2 BASIC19.67■□□□□ 0.74
PCDHB1Q9Y5F3 THEM4-205ENST00000489410 643 ntTSL 2 BASIC19.67■□□□□ 0.74
PCDHB1Q9Y5F3 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC19.67■□□□□ 0.74
PCDHB1Q9Y5F3 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHB1Q9Y5F3 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC19.67■□□□□ 0.74
PCDHB1Q9Y5F3 AC005829.2-201ENST00000571422 1056 ntBASIC19.67■□□□□ 0.74
PCDHB1Q9Y5F3 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC19.67■□□□□ 0.74
PCDHB1Q9Y5F3 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC19.67■□□□□ 0.74
PCDHB1Q9Y5F3 MTDHP1-201ENST00000605323 784 ntBASIC19.67■□□□□ 0.74
PCDHB1Q9Y5F3 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHB1Q9Y5F3 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHB1Q9Y5F3 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHB1Q9Y5F3 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHB1Q9Y5F3 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHB1Q9Y5F3 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC19.67■□□□□ 0.74
PCDHB1Q9Y5F3 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC19.67■□□□□ 0.74
PCDHB1Q9Y5F3 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC19.67■□□□□ 0.74
PCDHB1Q9Y5F3 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PCDHB1Q9Y5F3 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC19.66■□□□□ 0.74
PCDHB1Q9Y5F3 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
PCDHB1Q9Y5F3 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC19.66■□□□□ 0.74
PCDHB1Q9Y5F3 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
PCDHB1Q9Y5F3 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
PCDHB1Q9Y5F3 PHGDH-210ENST00000641115 1638 ntBASIC19.66■□□□□ 0.74
PCDHB1Q9Y5F3 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PCDHB1Q9Y5F3 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
PCDHB1Q9Y5F3 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
PCDHB1Q9Y5F3 SERF2-207ENST00000409614 582 ntTSL 2 BASIC19.66■□□□□ 0.74
PCDHB1Q9Y5F3 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC19.66■□□□□ 0.74
PCDHB1Q9Y5F3 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC19.66■□□□□ 0.74
PCDHB1Q9Y5F3 ABHD17AP6-201ENST00000458502 1044 ntBASIC19.66■□□□□ 0.74
PCDHB1Q9Y5F3 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
PCDHB1Q9Y5F3 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
PCDHB1Q9Y5F3 LY6E-205ENST00000519611 635 ntTSL 3 BASIC19.66■□□□□ 0.74
PCDHB1Q9Y5F3 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC19.66■□□□□ 0.74
PCDHB1Q9Y5F3 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC19.66■□□□□ 0.74
PCDHB1Q9Y5F3 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC19.66■□□□□ 0.74
PCDHB1Q9Y5F3 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC19.66■□□□□ 0.74
PCDHB1Q9Y5F3 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC19.66■□□□□ 0.74
PCDHB1Q9Y5F3 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
PCDHB1Q9Y5F3 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
PCDHB1Q9Y5F3 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
PCDHB1Q9Y5F3 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC19.66■□□□□ 0.74
PCDHB1Q9Y5F3 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC19.66■□□□□ 0.74
PCDHB1Q9Y5F3 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC19.66■□□□□ 0.74
PCDHB1Q9Y5F3 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PCDHB1Q9Y5F3 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PCDHB1Q9Y5F3 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PCDHB1Q9Y5F3 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
PCDHB1Q9Y5F3 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.66■□□□□ 0.74
PCDHB1Q9Y5F3 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC19.66■□□□□ 0.74
PCDHB1Q9Y5F3 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PCDHB1Q9Y5F3 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PCDHB1Q9Y5F3 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PCDHB1Q9Y5F3 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCDHB1Q9Y5F3 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
PCDHB1Q9Y5F3 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PCDHB1Q9Y5F3 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PCDHB1Q9Y5F3 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCDHB1Q9Y5F3 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCDHB1Q9Y5F3 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PCDHB1Q9Y5F3 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC19.65■□□□□ 0.74
PCDHB1Q9Y5F3 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
PCDHB1Q9Y5F3 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC19.65■□□□□ 0.74
PCDHB1Q9Y5F3 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC19.65■□□□□ 0.74
PCDHB1Q9Y5F3 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PCDHB1Q9Y5F3 AC124016.1-201ENST00000609552 612 ntBASIC19.65■□□□□ 0.74
PCDHB1Q9Y5F3 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
PCDHB1Q9Y5F3 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC19.65■□□□□ 0.74
PCDHB1Q9Y5F3 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms