Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
UBE2D4Q9Y2X8 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
UBE2D4Q9Y2X8 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
UBE2D4Q9Y2X8 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
UBE2D4Q9Y2X8 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC13.68□□□□□ -0.22
UBE2D4Q9Y2X8 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
UBE2D4Q9Y2X8 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
UBE2D4Q9Y2X8 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
UBE2D4Q9Y2X8 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
UBE2D4Q9Y2X8 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC13.68□□□□□ -0.22
UBE2D4Q9Y2X8 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
UBE2D4Q9Y2X8 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
UBE2D4Q9Y2X8 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC13.68□□□□□ -0.22
UBE2D4Q9Y2X8 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
UBE2D4Q9Y2X8 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC13.68□□□□□ -0.22
UBE2D4Q9Y2X8 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
UBE2D4Q9Y2X8 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC13.68□□□□□ -0.22
UBE2D4Q9Y2X8 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC13.68□□□□□ -0.22
UBE2D4Q9Y2X8 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC13.68□□□□□ -0.22
UBE2D4Q9Y2X8 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
UBE2D4Q9Y2X8 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC13.68□□□□□ -0.22
UBE2D4Q9Y2X8 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC13.68□□□□□ -0.22
UBE2D4Q9Y2X8 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
UBE2D4Q9Y2X8 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
UBE2D4Q9Y2X8 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
UBE2D4Q9Y2X8 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
UBE2D4Q9Y2X8 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC13.68□□□□□ -0.22
UBE2D4Q9Y2X8 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
UBE2D4Q9Y2X8 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC13.68□□□□□ -0.22
UBE2D4Q9Y2X8 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
UBE2D4Q9Y2X8 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
UBE2D4Q9Y2X8 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC13.68□□□□□ -0.22
UBE2D4Q9Y2X8 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
UBE2D4Q9Y2X8 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
UBE2D4Q9Y2X8 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
UBE2D4Q9Y2X8 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
UBE2D4Q9Y2X8 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC13.67□□□□□ -0.22
UBE2D4Q9Y2X8 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
UBE2D4Q9Y2X8 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
UBE2D4Q9Y2X8 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
UBE2D4Q9Y2X8 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
UBE2D4Q9Y2X8 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
UBE2D4Q9Y2X8 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
UBE2D4Q9Y2X8 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
UBE2D4Q9Y2X8 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
UBE2D4Q9Y2X8 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
UBE2D4Q9Y2X8 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
UBE2D4Q9Y2X8 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
UBE2D4Q9Y2X8 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
UBE2D4Q9Y2X8 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC13.67□□□□□ -0.22
UBE2D4Q9Y2X8 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
UBE2D4Q9Y2X8 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
UBE2D4Q9Y2X8 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
UBE2D4Q9Y2X8 PARP1-202ENST00000366792 553 ntTSL 3 BASIC13.67□□□□□ -0.22
UBE2D4Q9Y2X8 JTB-203ENST00000368589 1216 ntTSL 2 BASIC13.67□□□□□ -0.22
UBE2D4Q9Y2X8 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
UBE2D4Q9Y2X8 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
UBE2D4Q9Y2X8 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC13.67□□□□□ -0.22
UBE2D4Q9Y2X8 TERF1P5-201ENST00000477545 1207 ntBASIC13.67□□□□□ -0.22
UBE2D4Q9Y2X8 PBX1-209ENST00000485769 834 ntTSL 2 BASIC13.67□□□□□ -0.22
UBE2D4Q9Y2X8 AL162412.1-201ENST00000567129 965 ntBASIC13.67□□□□□ -0.22
UBE2D4Q9Y2X8 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC13.67□□□□□ -0.22
UBE2D4Q9Y2X8 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
UBE2D4Q9Y2X8 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
UBE2D4Q9Y2X8 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
UBE2D4Q9Y2X8 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
UBE2D4Q9Y2X8 GAS2L1P2-201ENST00000436355 1356 ntBASIC13.67□□□□□ -0.22
UBE2D4Q9Y2X8 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
UBE2D4Q9Y2X8 PHGDH-210ENST00000641115 1638 ntBASIC13.67□□□□□ -0.22
UBE2D4Q9Y2X8 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
UBE2D4Q9Y2X8 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
UBE2D4Q9Y2X8 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
UBE2D4Q9Y2X8 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
UBE2D4Q9Y2X8 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
UBE2D4Q9Y2X8 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
UBE2D4Q9Y2X8 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
UBE2D4Q9Y2X8 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
UBE2D4Q9Y2X8 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
UBE2D4Q9Y2X8 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
UBE2D4Q9Y2X8 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC13.66□□□□□ -0.22
UBE2D4Q9Y2X8 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
UBE2D4Q9Y2X8 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
UBE2D4Q9Y2X8 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
UBE2D4Q9Y2X8 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
UBE2D4Q9Y2X8 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
UBE2D4Q9Y2X8 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
UBE2D4Q9Y2X8 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC13.66□□□□□ -0.22
UBE2D4Q9Y2X8 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
UBE2D4Q9Y2X8 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
UBE2D4Q9Y2X8 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
UBE2D4Q9Y2X8 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
UBE2D4Q9Y2X8 HLA-G-202ENST00000376815 851 ntBASIC13.66□□□□□ -0.22
UBE2D4Q9Y2X8 HLA-G-203ENST00000376818 1127 ntBASIC13.66□□□□□ -0.22
UBE2D4Q9Y2X8 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC13.66□□□□□ -0.22
UBE2D4Q9Y2X8 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
UBE2D4Q9Y2X8 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC13.66□□□□□ -0.22
UBE2D4Q9Y2X8 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
UBE2D4Q9Y2X8 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
UBE2D4Q9Y2X8 RAB43-208ENST00000615093 783 ntTSL 5 BASIC13.66□□□□□ -0.22
UBE2D4Q9Y2X8 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC13.66□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms