Protein–RNA interactions for Protein: Q9Y2S0

POLR1D, DNA-directed RNA polymerases I and III subunit RPAC2, humanhuman

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1DQ9Y2S0 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
POLR1DQ9Y2S0 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
POLR1DQ9Y2S0 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
POLR1DQ9Y2S0 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC17.57■□□□□ 0.4
POLR1DQ9Y2S0 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
POLR1DQ9Y2S0 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
POLR1DQ9Y2S0 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
POLR1DQ9Y2S0 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC17.57■□□□□ 0.4
POLR1DQ9Y2S0 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
POLR1DQ9Y2S0 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
POLR1DQ9Y2S0 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
POLR1DQ9Y2S0 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
POLR1DQ9Y2S0 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
POLR1DQ9Y2S0 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
POLR1DQ9Y2S0 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
POLR1DQ9Y2S0 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
POLR1DQ9Y2S0 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
POLR1DQ9Y2S0 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
POLR1DQ9Y2S0 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC17.56■□□□□ 0.4
POLR1DQ9Y2S0 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC17.56■□□□□ 0.4
POLR1DQ9Y2S0 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC17.56■□□□□ 0.4
POLR1DQ9Y2S0 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC17.56■□□□□ 0.4
POLR1DQ9Y2S0 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC17.56■□□□□ 0.4
POLR1DQ9Y2S0 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC17.56■□□□□ 0.4
POLR1DQ9Y2S0 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
POLR1DQ9Y2S0 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC17.56■□□□□ 0.4
POLR1DQ9Y2S0 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
POLR1DQ9Y2S0 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC17.56■□□□□ 0.4
POLR1DQ9Y2S0 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
POLR1DQ9Y2S0 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
POLR1DQ9Y2S0 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
POLR1DQ9Y2S0 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
POLR1DQ9Y2S0 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC17.56■□□□□ 0.4
POLR1DQ9Y2S0 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
POLR1DQ9Y2S0 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
POLR1DQ9Y2S0 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC17.55■□□□□ 0.4
POLR1DQ9Y2S0 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC17.55■□□□□ 0.4
POLR1DQ9Y2S0 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
POLR1DQ9Y2S0 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
POLR1DQ9Y2S0 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
POLR1DQ9Y2S0 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC17.55■□□□□ 0.4
POLR1DQ9Y2S0 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC17.55■□□□□ 0.4
POLR1DQ9Y2S0 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
POLR1DQ9Y2S0 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC17.55■□□□□ 0.4
POLR1DQ9Y2S0 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
POLR1DQ9Y2S0 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
POLR1DQ9Y2S0 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
POLR1DQ9Y2S0 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
POLR1DQ9Y2S0 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
POLR1DQ9Y2S0 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
POLR1DQ9Y2S0 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
POLR1DQ9Y2S0 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC17.55■□□□□ 0.4
POLR1DQ9Y2S0 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC17.55■□□□□ 0.4
POLR1DQ9Y2S0 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
POLR1DQ9Y2S0 AL050303.2-201ENST00000619798 666 ntBASIC17.55■□□□□ 0.4
POLR1DQ9Y2S0 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
POLR1DQ9Y2S0 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
POLR1DQ9Y2S0 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
POLR1DQ9Y2S0 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
POLR1DQ9Y2S0 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
POLR1DQ9Y2S0 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
POLR1DQ9Y2S0 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
POLR1DQ9Y2S0 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
POLR1DQ9Y2S0 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
POLR1DQ9Y2S0 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
POLR1DQ9Y2S0 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
POLR1DQ9Y2S0 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC17.54■□□□□ 0.4
POLR1DQ9Y2S0 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
POLR1DQ9Y2S0 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
POLR1DQ9Y2S0 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
POLR1DQ9Y2S0 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
POLR1DQ9Y2S0 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
POLR1DQ9Y2S0 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
POLR1DQ9Y2S0 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
POLR1DQ9Y2S0 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
POLR1DQ9Y2S0 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC17.54■□□□□ 0.4
POLR1DQ9Y2S0 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
POLR1DQ9Y2S0 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC17.54■□□□□ 0.4
POLR1DQ9Y2S0 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
POLR1DQ9Y2S0 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
POLR1DQ9Y2S0 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
POLR1DQ9Y2S0 OR6D1P-202ENST00000641007 5290 ntBASIC17.54■□□□□ 0.4
POLR1DQ9Y2S0 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
POLR1DQ9Y2S0 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
POLR1DQ9Y2S0 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
POLR1DQ9Y2S0 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
POLR1DQ9Y2S0 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC17.54■□□□□ 0.4
POLR1DQ9Y2S0 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
POLR1DQ9Y2S0 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC17.54■□□□□ 0.4
POLR1DQ9Y2S0 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
POLR1DQ9Y2S0 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC17.53■□□□□ 0.4
POLR1DQ9Y2S0 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
POLR1DQ9Y2S0 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC17.53■□□□□ 0.4
POLR1DQ9Y2S0 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
POLR1DQ9Y2S0 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
POLR1DQ9Y2S0 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC17.53■□□□□ 0.4
POLR1DQ9Y2S0 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC17.53■□□□□ 0.4
POLR1DQ9Y2S0 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
POLR1DQ9Y2S0 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC17.53■□□□□ 0.4
POLR1DQ9Y2S0 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms