Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC20.79■□□□□ 0.92
PCDHGC3Q9UN70 AC069544.1-201ENST00000609399 999 ntBASIC20.79■□□□□ 0.92
PCDHGC3Q9UN70 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PCDHGC3Q9UN70 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
PCDHGC3Q9UN70 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
PCDHGC3Q9UN70 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC20.79■□□□□ 0.92
PCDHGC3Q9UN70 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC20.79■□□□□ 0.92
PCDHGC3Q9UN70 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC20.79■□□□□ 0.92
PCDHGC3Q9UN70 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PCDHGC3Q9UN70 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC20.79■□□□□ 0.92
PCDHGC3Q9UN70 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PCDHGC3Q9UN70 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
PCDHGC3Q9UN70 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
PCDHGC3Q9UN70 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PCDHGC3Q9UN70 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PCDHGC3Q9UN70 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
PCDHGC3Q9UN70 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC20.78■□□□□ 0.92
PCDHGC3Q9UN70 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
PCDHGC3Q9UN70 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC20.78■□□□□ 0.92
PCDHGC3Q9UN70 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PCDHGC3Q9UN70 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
PCDHGC3Q9UN70 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC20.78■□□□□ 0.92
PCDHGC3Q9UN70 ADM-205ENST00000528544 586 ntTSL 2 BASIC20.78■□□□□ 0.92
PCDHGC3Q9UN70 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
PCDHGC3Q9UN70 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC20.78■□□□□ 0.92
PCDHGC3Q9UN70 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC20.78■□□□□ 0.92
PCDHGC3Q9UN70 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PCDHGC3Q9UN70 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
PCDHGC3Q9UN70 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
PCDHGC3Q9UN70 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
PCDHGC3Q9UN70 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PCDHGC3Q9UN70 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PCDHGC3Q9UN70 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PCDHGC3Q9UN70 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC20.77■□□□□ 0.92
PCDHGC3Q9UN70 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
PCDHGC3Q9UN70 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC20.77■□□□□ 0.92
PCDHGC3Q9UN70 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
PCDHGC3Q9UN70 MTDHP1-201ENST00000605323 784 ntBASIC20.77■□□□□ 0.92
PCDHGC3Q9UN70 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PCDHGC3Q9UN70 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
PCDHGC3Q9UN70 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
PCDHGC3Q9UN70 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
PCDHGC3Q9UN70 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
PCDHGC3Q9UN70 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
PCDHGC3Q9UN70 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PCDHGC3Q9UN70 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
PCDHGC3Q9UN70 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PCDHGC3Q9UN70 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PCDHGC3Q9UN70 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
PCDHGC3Q9UN70 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PCDHGC3Q9UN70 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PCDHGC3Q9UN70 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PCDHGC3Q9UN70 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC20.76■□□□□ 0.91
PCDHGC3Q9UN70 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC20.76■□□□□ 0.91
PCDHGC3Q9UN70 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC20.76■□□□□ 0.91
PCDHGC3Q9UN70 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC20.76■□□□□ 0.91
PCDHGC3Q9UN70 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC20.76■□□□□ 0.91
PCDHGC3Q9UN70 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
PCDHGC3Q9UN70 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC20.76■□□□□ 0.91
PCDHGC3Q9UN70 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PCDHGC3Q9UN70 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC20.76■□□□□ 0.91
PCDHGC3Q9UN70 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PCDHGC3Q9UN70 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
PCDHGC3Q9UN70 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC20.76■□□□□ 0.91
PCDHGC3Q9UN70 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PCDHGC3Q9UN70 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PCDHGC3Q9UN70 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PCDHGC3Q9UN70 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PCDHGC3Q9UN70 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC20.75■□□□□ 0.91
PCDHGC3Q9UN70 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PCDHGC3Q9UN70 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PCDHGC3Q9UN70 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PCDHGC3Q9UN70 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC20.75■□□□□ 0.91
PCDHGC3Q9UN70 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PCDHGC3Q9UN70 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
PCDHGC3Q9UN70 KRT18P16-201ENST00000510337 1294 ntBASIC20.75■□□□□ 0.91
PCDHGC3Q9UN70 PRKY-204ENST00000533551 1019 ntBASIC20.75■□□□□ 0.91
PCDHGC3Q9UN70 AC233263.1-201ENST00000578059 224 ntBASIC20.75■□□□□ 0.91
PCDHGC3Q9UN70 Six3os1_6.1-201ENST00000620790 196 ntBASIC20.75■□□□□ 0.91
PCDHGC3Q9UN70 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
PCDHGC3Q9UN70 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC20.75■□□□□ 0.91
PCDHGC3Q9UN70 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PCDHGC3Q9UN70 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC20.75■□□□□ 0.91
PCDHGC3Q9UN70 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
PCDHGC3Q9UN70 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC20.75■□□□□ 0.91
PCDHGC3Q9UN70 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PCDHGC3Q9UN70 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
PCDHGC3Q9UN70 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PCDHGC3Q9UN70 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC20.75■□□□□ 0.91
PCDHGC3Q9UN70 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
PCDHGC3Q9UN70 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PCDHGC3Q9UN70 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC20.74■□□□□ 0.91
PCDHGC3Q9UN70 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC20.74■□□□□ 0.91
PCDHGC3Q9UN70 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
PCDHGC3Q9UN70 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PCDHGC3Q9UN70 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC20.74■□□□□ 0.91
PCDHGC3Q9UN70 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PCDHGC3Q9UN70 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PCDHGC3Q9UN70 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PCDHGC3Q9UN70 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms