Protein–RNA interactions for Protein: Q9NZI6

TFCP2L1, Transcription factor CP2-like protein 1, humanhuman

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TFCP2L1Q9NZI6 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
TFCP2L1Q9NZI6 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
TFCP2L1Q9NZI6 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
TFCP2L1Q9NZI6 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
TFCP2L1Q9NZI6 GOLGA6L3-201ENST00000507199 1679 ntBASIC25.04■■□□□ 1.6
TFCP2L1Q9NZI6 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
TFCP2L1Q9NZI6 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC25.04■■□□□ 1.6
TFCP2L1Q9NZI6 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC25.04■■□□□ 1.6
TFCP2L1Q9NZI6 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
TFCP2L1Q9NZI6 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
TFCP2L1Q9NZI6 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC25.04■■□□□ 1.6
TFCP2L1Q9NZI6 FXN-203ENST00000396366 922 ntTSL 2 BASIC25.04■■□□□ 1.6
TFCP2L1Q9NZI6 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC25.04■■□□□ 1.6
TFCP2L1Q9NZI6 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC25.04■■□□□ 1.6
TFCP2L1Q9NZI6 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC25.04■■□□□ 1.6
TFCP2L1Q9NZI6 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC25.04■■□□□ 1.6
TFCP2L1Q9NZI6 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC25.04■■□□□ 1.6
TFCP2L1Q9NZI6 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
TFCP2L1Q9NZI6 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC25.04■■□□□ 1.6
TFCP2L1Q9NZI6 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
TFCP2L1Q9NZI6 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC25.03■■□□□ 1.6
TFCP2L1Q9NZI6 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC25.03■■□□□ 1.6
TFCP2L1Q9NZI6 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC25.03■■□□□ 1.6
TFCP2L1Q9NZI6 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
TFCP2L1Q9NZI6 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
TFCP2L1Q9NZI6 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
TFCP2L1Q9NZI6 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC25.03■■□□□ 1.6
TFCP2L1Q9NZI6 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
TFCP2L1Q9NZI6 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC25.03■■□□□ 1.6
TFCP2L1Q9NZI6 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
TFCP2L1Q9NZI6 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC25.03■■□□□ 1.6
TFCP2L1Q9NZI6 KLK8-205ENST00000593490 267 ntTSL 3 BASIC25.03■■□□□ 1.6
TFCP2L1Q9NZI6 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC25.03■■□□□ 1.6
TFCP2L1Q9NZI6 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC25.03■■□□□ 1.6
TFCP2L1Q9NZI6 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
TFCP2L1Q9NZI6 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
TFCP2L1Q9NZI6 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
TFCP2L1Q9NZI6 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
TFCP2L1Q9NZI6 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC25.02■■□□□ 1.6
TFCP2L1Q9NZI6 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC25.02■■□□□ 1.6
TFCP2L1Q9NZI6 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
TFCP2L1Q9NZI6 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
TFCP2L1Q9NZI6 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
TFCP2L1Q9NZI6 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC25.02■■□□□ 1.6
TFCP2L1Q9NZI6 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC25.02■■□□□ 1.6
TFCP2L1Q9NZI6 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC25.02■■□□□ 1.6
TFCP2L1Q9NZI6 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
TFCP2L1Q9NZI6 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC25.02■■□□□ 1.6
TFCP2L1Q9NZI6 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC25.02■■□□□ 1.6
TFCP2L1Q9NZI6 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
TFCP2L1Q9NZI6 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
TFCP2L1Q9NZI6 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC25.02■■□□□ 1.6
TFCP2L1Q9NZI6 TUB-203ENST00000534099 1759 ntTSL 2 BASIC25.02■■□□□ 1.6
TFCP2L1Q9NZI6 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC25.02■■□□□ 1.6
TFCP2L1Q9NZI6 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
TFCP2L1Q9NZI6 AC018553.1-201ENST00000616682 1458 ntBASIC25.02■■□□□ 1.6
TFCP2L1Q9NZI6 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
TFCP2L1Q9NZI6 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC25.01■■□□□ 1.59
TFCP2L1Q9NZI6 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC25.01■■□□□ 1.59
TFCP2L1Q9NZI6 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
TFCP2L1Q9NZI6 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
TFCP2L1Q9NZI6 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
TFCP2L1Q9NZI6 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC25.01■■□□□ 1.59
TFCP2L1Q9NZI6 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC25.01■■□□□ 1.59
TFCP2L1Q9NZI6 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC25.01■■□□□ 1.59
TFCP2L1Q9NZI6 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC25.01■■□□□ 1.59
TFCP2L1Q9NZI6 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
TFCP2L1Q9NZI6 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
TFCP2L1Q9NZI6 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
TFCP2L1Q9NZI6 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC25.01■■□□□ 1.59
TFCP2L1Q9NZI6 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC25.01■■□□□ 1.59
TFCP2L1Q9NZI6 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC25.01■■□□□ 1.59
TFCP2L1Q9NZI6 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
TFCP2L1Q9NZI6 AC121338.2-201ENST00000622535 1744 ntBASIC25■■□□□ 1.59
TFCP2L1Q9NZI6 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
TFCP2L1Q9NZI6 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC25■■□□□ 1.59
TFCP2L1Q9NZI6 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC25■■□□□ 1.59
TFCP2L1Q9NZI6 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC25■■□□□ 1.59
TFCP2L1Q9NZI6 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
TFCP2L1Q9NZI6 SNX5-210ENST00000481323 562 ntTSL 3 BASIC25■■□□□ 1.59
TFCP2L1Q9NZI6 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC25■■□□□ 1.59
TFCP2L1Q9NZI6 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC25■■□□□ 1.59
TFCP2L1Q9NZI6 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC25■■□□□ 1.59
TFCP2L1Q9NZI6 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC25■■□□□ 1.59
TFCP2L1Q9NZI6 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC25■■□□□ 1.59
TFCP2L1Q9NZI6 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC25■■□□□ 1.59
TFCP2L1Q9NZI6 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC25■■□□□ 1.59
TFCP2L1Q9NZI6 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC25■■□□□ 1.59
TFCP2L1Q9NZI6 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC24.99■■□□□ 1.59
TFCP2L1Q9NZI6 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
TFCP2L1Q9NZI6 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
TFCP2L1Q9NZI6 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
TFCP2L1Q9NZI6 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
TFCP2L1Q9NZI6 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC24.99■■□□□ 1.59
TFCP2L1Q9NZI6 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
TFCP2L1Q9NZI6 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC24.99■■□□□ 1.59
TFCP2L1Q9NZI6 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC24.99■■□□□ 1.59
TFCP2L1Q9NZI6 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC24.99■■□□□ 1.59
TFCP2L1Q9NZI6 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC24.99■■□□□ 1.59
TFCP2L1Q9NZI6 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms