Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC21.01■□□□□ 0.95
CISHQ9NSE2 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CISHQ9NSE2 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC21.01■□□□□ 0.95
CISHQ9NSE2 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CISHQ9NSE2 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC21.01■□□□□ 0.95
CISHQ9NSE2 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC21.01■□□□□ 0.95
CISHQ9NSE2 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
CISHQ9NSE2 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CISHQ9NSE2 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CISHQ9NSE2 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CISHQ9NSE2 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC21■□□□□ 0.95
CISHQ9NSE2 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CISHQ9NSE2 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
CISHQ9NSE2 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC21■□□□□ 0.95
CISHQ9NSE2 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC21■□□□□ 0.95
CISHQ9NSE2 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC21■□□□□ 0.95
CISHQ9NSE2 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
CISHQ9NSE2 AL023875.1-201ENST00000640777 796 ntBASIC21■□□□□ 0.95
CISHQ9NSE2 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
CISHQ9NSE2 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC21■□□□□ 0.95
CISHQ9NSE2 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC21■□□□□ 0.95
CISHQ9NSE2 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC21■□□□□ 0.95
CISHQ9NSE2 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC20.99■□□□□ 0.95
CISHQ9NSE2 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC20.99■□□□□ 0.95
CISHQ9NSE2 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CISHQ9NSE2 GOLGA6L3-201ENST00000507199 1679 ntBASIC20.99■□□□□ 0.95
CISHQ9NSE2 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CISHQ9NSE2 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CISHQ9NSE2 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CISHQ9NSE2 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CISHQ9NSE2 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CISHQ9NSE2 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
CISHQ9NSE2 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CISHQ9NSE2 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CISHQ9NSE2 KRT18P29-201ENST00000397031 1267 ntBASIC20.99■□□□□ 0.95
CISHQ9NSE2 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC20.99■□□□□ 0.95
CISHQ9NSE2 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CISHQ9NSE2 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CISHQ9NSE2 MMD2-204ENST00000612910 778 ntTSL 5 BASIC20.99■□□□□ 0.95
CISHQ9NSE2 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
CISHQ9NSE2 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC20.99■□□□□ 0.95
CISHQ9NSE2 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CISHQ9NSE2 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
CISHQ9NSE2 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC20.99■□□□□ 0.95
CISHQ9NSE2 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC20.99■□□□□ 0.95
CISHQ9NSE2 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CISHQ9NSE2 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC20.99■□□□□ 0.95
CISHQ9NSE2 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
CISHQ9NSE2 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CISHQ9NSE2 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC20.98■□□□□ 0.95
CISHQ9NSE2 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CISHQ9NSE2 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CISHQ9NSE2 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CISHQ9NSE2 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC20.98■□□□□ 0.95
CISHQ9NSE2 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC20.98■□□□□ 0.95
CISHQ9NSE2 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CISHQ9NSE2 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
CISHQ9NSE2 YBX1P10-201ENST00000444752 975 ntBASIC20.98■□□□□ 0.95
CISHQ9NSE2 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC20.98■□□□□ 0.95
CISHQ9NSE2 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC20.98■□□□□ 0.95
CISHQ9NSE2 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC20.98■□□□□ 0.95
CISHQ9NSE2 IRX5-204ENST00000560154 879 ntTSL 5 BASIC20.98■□□□□ 0.95
CISHQ9NSE2 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CISHQ9NSE2 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CISHQ9NSE2 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CISHQ9NSE2 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC20.98■□□□□ 0.95
CISHQ9NSE2 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC20.98■□□□□ 0.95
CISHQ9NSE2 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CISHQ9NSE2 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
CISHQ9NSE2 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CISHQ9NSE2 TREX1-205ENST00000625293 1783 ntBASIC20.97■□□□□ 0.95
CISHQ9NSE2 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
CISHQ9NSE2 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CISHQ9NSE2 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CISHQ9NSE2 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CISHQ9NSE2 AL158211.5-201ENST00000623583 2518 ntBASIC20.97■□□□□ 0.95
CISHQ9NSE2 NBPF21P-201ENST00000425093 1451 ntBASIC20.97■□□□□ 0.95
CISHQ9NSE2 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CISHQ9NSE2 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CISHQ9NSE2 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC20.97■□□□□ 0.95
CISHQ9NSE2 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CISHQ9NSE2 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC20.97■□□□□ 0.95
CISHQ9NSE2 SERF2-207ENST00000409614 582 ntTSL 2 BASIC20.97■□□□□ 0.95
CISHQ9NSE2 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CISHQ9NSE2 F2R-202ENST00000505600 442 ntTSL 2 BASIC20.97■□□□□ 0.95
CISHQ9NSE2 LY6E-205ENST00000519611 635 ntTSL 3 BASIC20.97■□□□□ 0.95
CISHQ9NSE2 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC20.97■□□□□ 0.95
CISHQ9NSE2 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC20.97■□□□□ 0.95
CISHQ9NSE2 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC20.97■□□□□ 0.95
CISHQ9NSE2 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
CISHQ9NSE2 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
CISHQ9NSE2 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC20.97■□□□□ 0.95
CISHQ9NSE2 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CISHQ9NSE2 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CISHQ9NSE2 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CISHQ9NSE2 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC20.97■□□□□ 0.95
CISHQ9NSE2 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CISHQ9NSE2 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CISHQ9NSE2 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CISHQ9NSE2 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC20.97■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 15 ms