Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC18.42■□□□□ 0.54
CHD8Q9HCK8 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CHD8Q9HCK8 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC18.42■□□□□ 0.54
CHD8Q9HCK8 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
CHD8Q9HCK8 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC18.42■□□□□ 0.54
CHD8Q9HCK8 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
CHD8Q9HCK8 AL121672.3-201ENST00000608644 468 ntBASIC18.42■□□□□ 0.54
CHD8Q9HCK8 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC18.42■□□□□ 0.54
CHD8Q9HCK8 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC18.42■□□□□ 0.54
CHD8Q9HCK8 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC18.41■□□□□ 0.54
CHD8Q9HCK8 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CHD8Q9HCK8 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC18.41■□□□□ 0.54
CHD8Q9HCK8 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC18.41■□□□□ 0.54
CHD8Q9HCK8 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CHD8Q9HCK8 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CHD8Q9HCK8 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CHD8Q9HCK8 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CHD8Q9HCK8 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CHD8Q9HCK8 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CHD8Q9HCK8 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CHD8Q9HCK8 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC18.41■□□□□ 0.54
CHD8Q9HCK8 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC18.41■□□□□ 0.54
CHD8Q9HCK8 MPI-205ENST00000562606 1052 ntTSL 3 BASIC18.41■□□□□ 0.54
CHD8Q9HCK8 AC055717.3-201ENST00000622967 595 ntBASIC18.41■□□□□ 0.54
CHD8Q9HCK8 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CHD8Q9HCK8 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC18.41■□□□□ 0.54
CHD8Q9HCK8 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CHD8Q9HCK8 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CHD8Q9HCK8 BX276092.5-203ENST00000456199 560 ntBASIC18.4■□□□□ 0.54
CHD8Q9HCK8 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CHD8Q9HCK8 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC18.4■□□□□ 0.54
CHD8Q9HCK8 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
CHD8Q9HCK8 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CHD8Q9HCK8 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CHD8Q9HCK8 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CHD8Q9HCK8 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CHD8Q9HCK8 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC18.4■□□□□ 0.54
CHD8Q9HCK8 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CHD8Q9HCK8 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CHD8Q9HCK8 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CHD8Q9HCK8 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CHD8Q9HCK8 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CHD8Q9HCK8 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC18.4■□□□□ 0.54
CHD8Q9HCK8 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
CHD8Q9HCK8 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC18.4■□□□□ 0.54
CHD8Q9HCK8 PALM-207ENST00000590161 2137 ntTSL 4 BASIC18.4■□□□□ 0.54
CHD8Q9HCK8 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CHD8Q9HCK8 TPSP2-201ENST00000561760 610 ntBASIC18.39■□□□□ 0.54
CHD8Q9HCK8 TERC-201ENST00000602385 541 ntBASIC18.39■□□□□ 0.54
CHD8Q9HCK8 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
CHD8Q9HCK8 AL691403.2-201ENST00000618460 490 ntBASIC18.39■□□□□ 0.54
CHD8Q9HCK8 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC18.39■□□□□ 0.54
CHD8Q9HCK8 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC18.39■□□□□ 0.53
CHD8Q9HCK8 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CHD8Q9HCK8 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
CHD8Q9HCK8 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC18.39■□□□□ 0.53
CHD8Q9HCK8 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC18.39■□□□□ 0.53
CHD8Q9HCK8 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CHD8Q9HCK8 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC18.39■□□□□ 0.53
CHD8Q9HCK8 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
CHD8Q9HCK8 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC18.39■□□□□ 0.53
CHD8Q9HCK8 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.53
CHD8Q9HCK8 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC18.39■□□□□ 0.53
CHD8Q9HCK8 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CHD8Q9HCK8 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC18.39■□□□□ 0.53
CHD8Q9HCK8 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CHD8Q9HCK8 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CHD8Q9HCK8 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CHD8Q9HCK8 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CHD8Q9HCK8 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CHD8Q9HCK8 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CHD8Q9HCK8 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC18.38■□□□□ 0.53
CHD8Q9HCK8 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC18.38■□□□□ 0.53
CHD8Q9HCK8 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC18.38■□□□□ 0.53
CHD8Q9HCK8 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC18.38■□□□□ 0.53
CHD8Q9HCK8 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CHD8Q9HCK8 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CHD8Q9HCK8 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC18.38■□□□□ 0.53
CHD8Q9HCK8 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC18.38■□□□□ 0.53
CHD8Q9HCK8 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CHD8Q9HCK8 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC18.38■□□□□ 0.53
CHD8Q9HCK8 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC18.38■□□□□ 0.53
CHD8Q9HCK8 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CHD8Q9HCK8 BMF-207ENST00000559701 630 ntTSL 3 BASIC18.38■□□□□ 0.53
CHD8Q9HCK8 NT5C-210ENST00000582160 860 ntTSL 2 BASIC18.38■□□□□ 0.53
CHD8Q9HCK8 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
CHD8Q9HCK8 TK1-205ENST00000590862 642 ntTSL 3 BASIC18.38■□□□□ 0.53
CHD8Q9HCK8 AL773604.1-201ENST00000617417 272 ntBASIC18.38■□□□□ 0.53
CHD8Q9HCK8 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
CHD8Q9HCK8 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CHD8Q9HCK8 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
CHD8Q9HCK8 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
CHD8Q9HCK8 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
CHD8Q9HCK8 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC18.37■□□□□ 0.53
CHD8Q9HCK8 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC18.37■□□□□ 0.53
CHD8Q9HCK8 AP000867.3-201ENST00000524675 377 ntBASIC18.37■□□□□ 0.53
CHD8Q9HCK8 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC18.37■□□□□ 0.53
CHD8Q9HCK8 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CHD8Q9HCK8 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CHD8Q9HCK8 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms