Protein–RNA interactions for Protein: Q9H444

CHMP4B, Charged multivesicular body protein 4b, humanhuman

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BQ9H444 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
CHMP4BQ9H444 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC24.82■■□□□ 1.56
CHMP4BQ9H444 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC24.82■■□□□ 1.56
CHMP4BQ9H444 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC24.82■■□□□ 1.56
CHMP4BQ9H444 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC24.82■■□□□ 1.56
CHMP4BQ9H444 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC24.82■■□□□ 1.56
CHMP4BQ9H444 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC24.82■■□□□ 1.56
CHMP4BQ9H444 POLI-202ENST00000406285 2030 ntTSL 2 BASIC24.82■■□□□ 1.56
CHMP4BQ9H444 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC24.82■■□□□ 1.56
CHMP4BQ9H444 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
CHMP4BQ9H444 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC24.82■■□□□ 1.56
CHMP4BQ9H444 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC24.82■■□□□ 1.56
CHMP4BQ9H444 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
CHMP4BQ9H444 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
CHMP4BQ9H444 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
CHMP4BQ9H444 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
CHMP4BQ9H444 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
CHMP4BQ9H444 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
CHMP4BQ9H444 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
CHMP4BQ9H444 SLC29A4P2-201ENST00000504749 1089 ntBASIC24.81■■□□□ 1.56
CHMP4BQ9H444 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC24.81■■□□□ 1.56
CHMP4BQ9H444 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC24.81■■□□□ 1.56
CHMP4BQ9H444 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC24.81■■□□□ 1.56
CHMP4BQ9H444 AC120498.8-201ENST00000614275 531 ntBASIC24.81■■□□□ 1.56
CHMP4BQ9H444 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC24.81■■□□□ 1.56
CHMP4BQ9H444 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
CHMP4BQ9H444 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
CHMP4BQ9H444 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
CHMP4BQ9H444 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC24.81■■□□□ 1.56
CHMP4BQ9H444 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
CHMP4BQ9H444 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC24.81■■□□□ 1.56
CHMP4BQ9H444 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC24.8■■□□□ 1.56
CHMP4BQ9H444 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC24.8■■□□□ 1.56
CHMP4BQ9H444 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC24.8■■□□□ 1.56
CHMP4BQ9H444 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
CHMP4BQ9H444 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
CHMP4BQ9H444 AIRN-201ENST00000601203 4374 ntBASIC24.8■■□□□ 1.56
CHMP4BQ9H444 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC24.8■■□□□ 1.56
CHMP4BQ9H444 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC24.8■■□□□ 1.56
CHMP4BQ9H444 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC24.8■■□□□ 1.56
CHMP4BQ9H444 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
CHMP4BQ9H444 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC24.8■■□□□ 1.56
CHMP4BQ9H444 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC24.8■■□□□ 1.56
CHMP4BQ9H444 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC24.8■■□□□ 1.56
CHMP4BQ9H444 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC24.8■■□□□ 1.56
CHMP4BQ9H444 AC098934.4-201ENST00000564127 592 ntBASIC24.8■■□□□ 1.56
CHMP4BQ9H444 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC24.8■■□□□ 1.56
CHMP4BQ9H444 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
CHMP4BQ9H444 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
CHMP4BQ9H444 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC24.8■■□□□ 1.56
CHMP4BQ9H444 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC24.8■■□□□ 1.56
CHMP4BQ9H444 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC24.8■■□□□ 1.56
CHMP4BQ9H444 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC24.8■■□□□ 1.56
CHMP4BQ9H444 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
CHMP4BQ9H444 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
CHMP4BQ9H444 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC24.8■■□□□ 1.56
CHMP4BQ9H444 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC24.8■■□□□ 1.56
CHMP4BQ9H444 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC24.79■■□□□ 1.56
CHMP4BQ9H444 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC24.79■■□□□ 1.56
CHMP4BQ9H444 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
CHMP4BQ9H444 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC24.79■■□□□ 1.56
CHMP4BQ9H444 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC24.79■■□□□ 1.56
CHMP4BQ9H444 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
CHMP4BQ9H444 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC24.79■■□□□ 1.56
CHMP4BQ9H444 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
CHMP4BQ9H444 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
CHMP4BQ9H444 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
CHMP4BQ9H444 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
CHMP4BQ9H444 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
CHMP4BQ9H444 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC24.78■■□□□ 1.56
CHMP4BQ9H444 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC24.78■■□□□ 1.56
CHMP4BQ9H444 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC24.78■■□□□ 1.56
CHMP4BQ9H444 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
CHMP4BQ9H444 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC24.78■■□□□ 1.56
CHMP4BQ9H444 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
CHMP4BQ9H444 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC24.78■■□□□ 1.56
CHMP4BQ9H444 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC24.78■■□□□ 1.56
CHMP4BQ9H444 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC24.78■■□□□ 1.56
CHMP4BQ9H444 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
CHMP4BQ9H444 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC24.78■■□□□ 1.56
CHMP4BQ9H444 INO80E-214ENST00000620599 515 ntTSL 2 BASIC24.78■■□□□ 1.56
CHMP4BQ9H444 AL121829.2-201ENST00000620908 328 ntBASIC24.78■■□□□ 1.56
CHMP4BQ9H444 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC24.78■■□□□ 1.56
CHMP4BQ9H444 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC24.78■■□□□ 1.56
CHMP4BQ9H444 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
CHMP4BQ9H444 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC24.78■■□□□ 1.56
CHMP4BQ9H444 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC24.77■■□□□ 1.56
CHMP4BQ9H444 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
CHMP4BQ9H444 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
CHMP4BQ9H444 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC24.77■■□□□ 1.56
CHMP4BQ9H444 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC24.77■■□□□ 1.56
CHMP4BQ9H444 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
CHMP4BQ9H444 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
CHMP4BQ9H444 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
CHMP4BQ9H444 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC24.77■■□□□ 1.56
CHMP4BQ9H444 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
CHMP4BQ9H444 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC24.77■■□□□ 1.56
CHMP4BQ9H444 HLA-L-209ENST00000420110 1011 ntBASIC24.77■■□□□ 1.56
CHMP4BQ9H444 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC24.77■■□□□ 1.56
CHMP4BQ9H444 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms