Protein–RNA interactions for Protein: Q9H251

CDH23, Cadherin-23, humanhuman

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23Q9H251 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC21.02■□□□□ 0.96
CDH23Q9H251 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC21.02■□□□□ 0.96
CDH23Q9H251 CKBP1-201ENST00000565489 1086 ntBASIC21.02■□□□□ 0.96
CDH23Q9H251 AC116562.4-202ENST00000641738 218 ntBASIC21.02■□□□□ 0.96
CDH23Q9H251 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CDH23Q9H251 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CDH23Q9H251 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CDH23Q9H251 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC21.02■□□□□ 0.96
CDH23Q9H251 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
CDH23Q9H251 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC21.02■□□□□ 0.95
CDH23Q9H251 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.95
CDH23Q9H251 AC092119.3-201ENST00000612618 583 ntBASIC21.02■□□□□ 0.95
CDH23Q9H251 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
CDH23Q9H251 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC21.01■□□□□ 0.95
CDH23Q9H251 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC21.01■□□□□ 0.95
CDH23Q9H251 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
CDH23Q9H251 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CDH23Q9H251 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CDH23Q9H251 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC21.01■□□□□ 0.95
CDH23Q9H251 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CDH23Q9H251 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CDH23Q9H251 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC21.01■□□□□ 0.95
CDH23Q9H251 SPDYE15P-201ENST00000424157 909 ntBASIC21■□□□□ 0.95
CDH23Q9H251 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC21■□□□□ 0.95
CDH23Q9H251 EMBP1-201ENST00000458200 901 ntBASIC21■□□□□ 0.95
CDH23Q9H251 SNX5-210ENST00000481323 562 ntTSL 3 BASIC21■□□□□ 0.95
CDH23Q9H251 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
CDH23Q9H251 AC141257.4-201ENST00000634557 245 ntBASIC21■□□□□ 0.95
CDH23Q9H251 AC136944.6-201ENST00000634818 245 ntBASIC21■□□□□ 0.95
CDH23Q9H251 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
CDH23Q9H251 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC21■□□□□ 0.95
CDH23Q9H251 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CDH23Q9H251 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CDH23Q9H251 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC21■□□□□ 0.95
CDH23Q9H251 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC21■□□□□ 0.95
CDH23Q9H251 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC21■□□□□ 0.95
CDH23Q9H251 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC21■□□□□ 0.95
CDH23Q9H251 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC21■□□□□ 0.95
CDH23Q9H251 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC21■□□□□ 0.95
CDH23Q9H251 AP006587.1-201ENST00000534129 1502 ntBASIC21■□□□□ 0.95
CDH23Q9H251 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC21■□□□□ 0.95
CDH23Q9H251 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC21■□□□□ 0.95
CDH23Q9H251 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC21■□□□□ 0.95
CDH23Q9H251 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC21■□□□□ 0.95
CDH23Q9H251 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC21■□□□□ 0.95
CDH23Q9H251 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
CDH23Q9H251 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CDH23Q9H251 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CDH23Q9H251 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC20.99■□□□□ 0.95
CDH23Q9H251 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CDH23Q9H251 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CDH23Q9H251 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CDH23Q9H251 AL136038.3-201ENST00000561909 1096 ntBASIC20.99■□□□□ 0.95
CDH23Q9H251 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC20.99■□□□□ 0.95
CDH23Q9H251 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC20.99■□□□□ 0.95
CDH23Q9H251 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
CDH23Q9H251 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CDH23Q9H251 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CDH23Q9H251 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
CDH23Q9H251 HMGN1P19-201ENST00000436976 333 ntBASIC20.99■□□□□ 0.95
CDH23Q9H251 AL732292.2-201ENST00000609649 430 ntBASIC20.99■□□□□ 0.95
CDH23Q9H251 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC20.99■□□□□ 0.95
CDH23Q9H251 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
CDH23Q9H251 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CDH23Q9H251 CYGB-204ENST00000589342 815 ntTSL 3 BASIC20.99■□□□□ 0.95
CDH23Q9H251 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
CDH23Q9H251 AC242852.2-201ENST00000615738 1807 ntBASIC20.98■□□□□ 0.95
CDH23Q9H251 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CDH23Q9H251 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CDH23Q9H251 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC20.98■□□□□ 0.95
CDH23Q9H251 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC20.98■□□□□ 0.95
CDH23Q9H251 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC20.98■□□□□ 0.95
CDH23Q9H251 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
CDH23Q9H251 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC20.98■□□□□ 0.95
CDH23Q9H251 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC20.98■□□□□ 0.95
CDH23Q9H251 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CDH23Q9H251 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC20.98■□□□□ 0.95
CDH23Q9H251 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
CDH23Q9H251 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC20.98■□□□□ 0.95
CDH23Q9H251 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC20.98■□□□□ 0.95
CDH23Q9H251 AL031008.1-201ENST00000619963 541 ntBASIC20.98■□□□□ 0.95
CDH23Q9H251 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
CDH23Q9H251 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
CDH23Q9H251 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
CDH23Q9H251 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
CDH23Q9H251 PRSS44-201ENST00000515154 1146 ntBASIC20.97■□□□□ 0.95
CDH23Q9H251 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC20.97■□□□□ 0.95
CDH23Q9H251 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC20.97■□□□□ 0.95
CDH23Q9H251 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CDH23Q9H251 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC20.97■□□□□ 0.95
CDH23Q9H251 AC106795.1-205ENST00000512851 1056 ntBASIC20.97■□□□□ 0.95
CDH23Q9H251 PRELID1P1-202ENST00000567272 903 ntBASIC20.97■□□□□ 0.95
CDH23Q9H251 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CDH23Q9H251 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CDH23Q9H251 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CDH23Q9H251 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CDH23Q9H251 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CDH23Q9H251 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CDH23Q9H251 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC20.97■□□□□ 0.95
CDH23Q9H251 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC20.97■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms