Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC20.69■□□□□ 0.9
SMOQ99835 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC20.69■□□□□ 0.9
SMOQ99835 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SMOQ99835 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SMOQ99835 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
SMOQ99835 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SMOQ99835 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SMOQ99835 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
SMOQ99835 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SMOQ99835 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
SMOQ99835 TUBB8P6-201ENST00000436895 1288 ntBASIC20.69■□□□□ 0.9
SMOQ99835 FDX2-207ENST00000494368 584 ntTSL 4 BASIC20.69■□□□□ 0.9
SMOQ99835 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SMOQ99835 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC20.69■□□□□ 0.9
SMOQ99835 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC20.69■□□□□ 0.9
SMOQ99835 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC20.69■□□□□ 0.9
SMOQ99835 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SMOQ99835 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
SMOQ99835 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SMOQ99835 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
SMOQ99835 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SMOQ99835 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
SMOQ99835 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SMOQ99835 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SMOQ99835 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC20.68■□□□□ 0.9
SMOQ99835 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SMOQ99835 SAPCD2P4-201ENST00000424595 1171 ntBASIC20.68■□□□□ 0.9
SMOQ99835 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC20.68■□□□□ 0.9
SMOQ99835 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SMOQ99835 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC20.68■□□□□ 0.9
SMOQ99835 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC20.68■□□□□ 0.9
SMOQ99835 C1QL1P1-201ENST00000568105 661 ntBASIC20.68■□□□□ 0.9
SMOQ99835 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SMOQ99835 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC20.68■□□□□ 0.9
SMOQ99835 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC20.68■□□□□ 0.9
SMOQ99835 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC20.68■□□□□ 0.9
SMOQ99835 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
SMOQ99835 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC20.68■□□□□ 0.9
SMOQ99835 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SMOQ99835 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SMOQ99835 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SMOQ99835 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SMOQ99835 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SMOQ99835 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SMOQ99835 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SMOQ99835 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC20.67■□□□□ 0.9
SMOQ99835 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
SMOQ99835 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SMOQ99835 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
SMOQ99835 SNORA78-201ENST00000459373 127 ntBASIC20.67■□□□□ 0.9
SMOQ99835 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC20.67■□□□□ 0.9
SMOQ99835 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC20.67■□□□□ 0.9
SMOQ99835 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SMOQ99835 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SMOQ99835 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
SMOQ99835 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.67■□□□□ 0.9
SMOQ99835 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC20.67■□□□□ 0.9
SMOQ99835 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
SMOQ99835 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SMOQ99835 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC20.66■□□□□ 0.9
SMOQ99835 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SMOQ99835 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC20.66■□□□□ 0.9
SMOQ99835 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
SMOQ99835 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SMOQ99835 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC20.66■□□□□ 0.9
SMOQ99835 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC20.66■□□□□ 0.9
SMOQ99835 MIR4497-201ENST00000583208 89 ntBASIC20.66■□□□□ 0.9
SMOQ99835 RPS15-203ENST00000586096 570 ntTSL 2 BASIC20.66■□□□□ 0.9
SMOQ99835 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SMOQ99835 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC20.66■□□□□ 0.9
SMOQ99835 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SMOQ99835 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SMOQ99835 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SMOQ99835 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SMOQ99835 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SMOQ99835 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
SMOQ99835 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC20.66■□□□□ 0.9
SMOQ99835 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SMOQ99835 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SMOQ99835 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC20.66■□□□□ 0.9
SMOQ99835 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
SMOQ99835 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SMOQ99835 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SMOQ99835 PCDHAC2-203ENST00000615316 3011 ntBASIC20.65■□□□□ 0.9
SMOQ99835 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
SMOQ99835 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SMOQ99835 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SMOQ99835 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC20.65■□□□□ 0.9
SMOQ99835 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC20.65■□□□□ 0.9
SMOQ99835 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SMOQ99835 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SMOQ99835 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SMOQ99835 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
SMOQ99835 AL353807.1-201ENST00000427475 662 ntBASIC20.65■□□□□ 0.9
SMOQ99835 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SMOQ99835 TSPY7P-201ENST00000431358 1114 ntBASIC20.65■□□□□ 0.9
SMOQ99835 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC20.65■□□□□ 0.9
SMOQ99835 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC20.65■□□□□ 0.9
SMOQ99835 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC20.65■□□□□ 0.9
SMOQ99835 AL353708.3-201ENST00000610272 989 ntBASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms