Protein–RNA interactions for Protein: Q96LT7

C9orf72, Guanine nucleotide exchange C9orf72, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72Q96LT7 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
C9orf72Q96LT7 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
C9orf72Q96LT7 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC20.21■□□□□ 0.83
C9orf72Q96LT7 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
C9orf72Q96LT7 PLLP-204ENST00000569059 665 ntTSL 3 BASIC20.21■□□□□ 0.83
C9orf72Q96LT7 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC20.21■□□□□ 0.83
C9orf72Q96LT7 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC20.21■□□□□ 0.83
C9orf72Q96LT7 PFKL-212ENST00000628044 129 ntTSL 3 BASIC20.21■□□□□ 0.83
C9orf72Q96LT7 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
C9orf72Q96LT7 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
C9orf72Q96LT7 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
C9orf72Q96LT7 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
C9orf72Q96LT7 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
C9orf72Q96LT7 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
C9orf72Q96LT7 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC20.21■□□□□ 0.83
C9orf72Q96LT7 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
C9orf72Q96LT7 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC20.21■□□□□ 0.83
C9orf72Q96LT7 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC20.21■□□□□ 0.83
C9orf72Q96LT7 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
C9orf72Q96LT7 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC20.2■□□□□ 0.82
C9orf72Q96LT7 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC20.2■□□□□ 0.82
C9orf72Q96LT7 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC20.2■□□□□ 0.82
C9orf72Q96LT7 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
C9orf72Q96LT7 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
C9orf72Q96LT7 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
C9orf72Q96LT7 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
C9orf72Q96LT7 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
C9orf72Q96LT7 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC20.2■□□□□ 0.82
C9orf72Q96LT7 APTR-205ENST00000447009 902 ntTSL 2 BASIC20.2■□□□□ 0.82
C9orf72Q96LT7 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC20.2■□□□□ 0.82
C9orf72Q96LT7 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC20.2■□□□□ 0.82
C9orf72Q96LT7 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC20.2■□□□□ 0.82
C9orf72Q96LT7 AL138781.1-201ENST00000566567 1274 ntBASIC20.2■□□□□ 0.82
C9orf72Q96LT7 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC20.2■□□□□ 0.82
C9orf72Q96LT7 AL591742.1-201ENST00000604433 565 ntBASIC20.2■□□□□ 0.82
C9orf72Q96LT7 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC20.2■□□□□ 0.82
C9orf72Q96LT7 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
C9orf72Q96LT7 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
C9orf72Q96LT7 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
C9orf72Q96LT7 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
C9orf72Q96LT7 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
C9orf72Q96LT7 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
C9orf72Q96LT7 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
C9orf72Q96LT7 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
C9orf72Q96LT7 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
C9orf72Q96LT7 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC20.2■□□□□ 0.82
C9orf72Q96LT7 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
C9orf72Q96LT7 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC20.19■□□□□ 0.82
C9orf72Q96LT7 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
C9orf72Q96LT7 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC20.19■□□□□ 0.82
C9orf72Q96LT7 STX6-204ENST00000542060 4809 ntTSL 2 BASIC20.19■□□□□ 0.82
C9orf72Q96LT7 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC20.19■□□□□ 0.82
C9orf72Q96LT7 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
C9orf72Q96LT7 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC20.19■□□□□ 0.82
C9orf72Q96LT7 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
C9orf72Q96LT7 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
C9orf72Q96LT7 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
C9orf72Q96LT7 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
C9orf72Q96LT7 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC20.19■□□□□ 0.82
C9orf72Q96LT7 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC20.19■□□□□ 0.82
C9orf72Q96LT7 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC20.19■□□□□ 0.82
C9orf72Q96LT7 AC016405.3-201ENST00000607710 860 ntBASIC20.19■□□□□ 0.82
C9orf72Q96LT7 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
C9orf72Q96LT7 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
C9orf72Q96LT7 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
C9orf72Q96LT7 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
C9orf72Q96LT7 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC20.19■□□□□ 0.82
C9orf72Q96LT7 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
C9orf72Q96LT7 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
C9orf72Q96LT7 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
C9orf72Q96LT7 KRT8P17-201ENST00000453110 1448 ntBASIC20.19■□□□□ 0.82
C9orf72Q96LT7 AC093503.3-201ENST00000624917 2352 ntBASIC20.19■□□□□ 0.82
C9orf72Q96LT7 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
C9orf72Q96LT7 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC20.18■□□□□ 0.82
C9orf72Q96LT7 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC20.18■□□□□ 0.82
C9orf72Q96LT7 AL032819.2-201ENST00000624543 2162 ntBASIC20.18■□□□□ 0.82
C9orf72Q96LT7 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
C9orf72Q96LT7 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
C9orf72Q96LT7 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
C9orf72Q96LT7 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
C9orf72Q96LT7 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
C9orf72Q96LT7 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC20.18■□□□□ 0.82
C9orf72Q96LT7 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC20.18■□□□□ 0.82
C9orf72Q96LT7 OR10C1-204ENST00000622521 1039 ntBASIC20.18■□□□□ 0.82
C9orf72Q96LT7 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
C9orf72Q96LT7 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
C9orf72Q96LT7 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
C9orf72Q96LT7 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC20.18■□□□□ 0.82
C9orf72Q96LT7 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
C9orf72Q96LT7 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC20.17■□□□□ 0.82
C9orf72Q96LT7 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
C9orf72Q96LT7 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC20.17■□□□□ 0.82
C9orf72Q96LT7 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC20.17■□□□□ 0.82
C9orf72Q96LT7 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
C9orf72Q96LT7 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
C9orf72Q96LT7 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC20.17■□□□□ 0.82
C9orf72Q96LT7 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC20.17■□□□□ 0.82
C9orf72Q96LT7 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
C9orf72Q96LT7 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC20.17■□□□□ 0.82
C9orf72Q96LT7 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 67.6 ms