Protein–RNA interactions for Protein: Q96JH7

VCPIP1, Deubiquitinating protein VCIP135, humanhuman

Predictions only

Length 1,222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPIP1Q96JH7 AC066615.1-201ENST00000640911 628 ntBASIC20.73■□□□□ 0.91
VCPIP1Q96JH7 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
VCPIP1Q96JH7 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
VCPIP1Q96JH7 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
VCPIP1Q96JH7 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
VCPIP1Q96JH7 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC20.73■□□□□ 0.91
VCPIP1Q96JH7 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
VCPIP1Q96JH7 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
VCPIP1Q96JH7 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
VCPIP1Q96JH7 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC20.72■□□□□ 0.91
VCPIP1Q96JH7 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC20.72■□□□□ 0.91
VCPIP1Q96JH7 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
VCPIP1Q96JH7 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC20.72■□□□□ 0.91
VCPIP1Q96JH7 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
VCPIP1Q96JH7 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
VCPIP1Q96JH7 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
VCPIP1Q96JH7 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
VCPIP1Q96JH7 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC20.72■□□□□ 0.91
VCPIP1Q96JH7 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
VCPIP1Q96JH7 RGMA-211ENST00000557420 989 ntTSL 3 BASIC20.72■□□□□ 0.91
VCPIP1Q96JH7 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
VCPIP1Q96JH7 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC20.72■□□□□ 0.91
VCPIP1Q96JH7 AC120498.8-201ENST00000614275 531 ntBASIC20.72■□□□□ 0.91
VCPIP1Q96JH7 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
VCPIP1Q96JH7 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
VCPIP1Q96JH7 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
VCPIP1Q96JH7 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
VCPIP1Q96JH7 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
VCPIP1Q96JH7 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
VCPIP1Q96JH7 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC20.71■□□□□ 0.91
VCPIP1Q96JH7 Z82202.1-201ENST00000623446 1880 ntBASIC20.71■□□□□ 0.91
VCPIP1Q96JH7 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
VCPIP1Q96JH7 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC20.71■□□□□ 0.91
VCPIP1Q96JH7 OR2A1-AS1-207ENST00000486094 819 ntBASIC20.71■□□□□ 0.91
VCPIP1Q96JH7 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC20.71■□□□□ 0.91
VCPIP1Q96JH7 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC20.71■□□□□ 0.91
VCPIP1Q96JH7 AL121906.2-201ENST00000621597 723 ntBASIC20.71■□□□□ 0.91
VCPIP1Q96JH7 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC20.71■□□□□ 0.91
VCPIP1Q96JH7 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
VCPIP1Q96JH7 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
VCPIP1Q96JH7 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC20.71■□□□□ 0.91
VCPIP1Q96JH7 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
VCPIP1Q96JH7 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
VCPIP1Q96JH7 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
VCPIP1Q96JH7 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
VCPIP1Q96JH7 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
VCPIP1Q96JH7 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
VCPIP1Q96JH7 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
VCPIP1Q96JH7 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
VCPIP1Q96JH7 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
VCPIP1Q96JH7 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC20.7■□□□□ 0.9
VCPIP1Q96JH7 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
VCPIP1Q96JH7 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
VCPIP1Q96JH7 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
VCPIP1Q96JH7 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
VCPIP1Q96JH7 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
VCPIP1Q96JH7 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
VCPIP1Q96JH7 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
VCPIP1Q96JH7 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC20.7■□□□□ 0.9
VCPIP1Q96JH7 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
VCPIP1Q96JH7 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
VCPIP1Q96JH7 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
VCPIP1Q96JH7 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
VCPIP1Q96JH7 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
VCPIP1Q96JH7 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
VCPIP1Q96JH7 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
VCPIP1Q96JH7 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
VCPIP1Q96JH7 AC124283.5-201ENST00000624661 1809 ntBASIC20.69■□□□□ 0.9
VCPIP1Q96JH7 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC20.69■□□□□ 0.9
VCPIP1Q96JH7 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
VCPIP1Q96JH7 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC20.69■□□□□ 0.9
VCPIP1Q96JH7 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.69■□□□□ 0.9
VCPIP1Q96JH7 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
VCPIP1Q96JH7 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
VCPIP1Q96JH7 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
VCPIP1Q96JH7 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
VCPIP1Q96JH7 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC20.69■□□□□ 0.9
VCPIP1Q96JH7 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
VCPIP1Q96JH7 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC20.69■□□□□ 0.9
VCPIP1Q96JH7 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC20.69■□□□□ 0.9
VCPIP1Q96JH7 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC20.69■□□□□ 0.9
VCPIP1Q96JH7 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC20.69■□□□□ 0.9
VCPIP1Q96JH7 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC20.69■□□□□ 0.9
VCPIP1Q96JH7 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
VCPIP1Q96JH7 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC20.69■□□□□ 0.9
VCPIP1Q96JH7 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
VCPIP1Q96JH7 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
VCPIP1Q96JH7 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
VCPIP1Q96JH7 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
VCPIP1Q96JH7 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
VCPIP1Q96JH7 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
VCPIP1Q96JH7 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC20.69■□□□□ 0.9
VCPIP1Q96JH7 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC20.69■□□□□ 0.9
VCPIP1Q96JH7 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
VCPIP1Q96JH7 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC20.68■□□□□ 0.9
VCPIP1Q96JH7 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
VCPIP1Q96JH7 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC20.68■□□□□ 0.9
VCPIP1Q96JH7 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC20.68■□□□□ 0.9
VCPIP1Q96JH7 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
VCPIP1Q96JH7 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms