Protein–RNA interactions for Protein: Q92922

SMARCC1, SWI/SNF complex subunit SMARCC1, humanhuman

Predicted RBP Predictions only

Length 1,105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1Q92922 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC25.26■■□□□ 1.63
SMARCC1Q92922 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC25.26■■□□□ 1.63
SMARCC1Q92922 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC25.26■■□□□ 1.63
SMARCC1Q92922 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC25.26■■□□□ 1.63
SMARCC1Q92922 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC25.26■■□□□ 1.63
SMARCC1Q92922 Z85996.1-201ENST00000494644 937 ntBASIC25.26■■□□□ 1.63
SMARCC1Q92922 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC25.26■■□□□ 1.63
SMARCC1Q92922 CD320-202ENST00000537716 1119 ntTSL 2 BASIC25.26■■□□□ 1.63
SMARCC1Q92922 AL353719.1-201ENST00000566847 864 ntBASIC25.26■■□□□ 1.63
SMARCC1Q92922 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC25.26■■□□□ 1.63
SMARCC1Q92922 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC25.26■■□□□ 1.63
SMARCC1Q92922 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC25.26■■□□□ 1.63
SMARCC1Q92922 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC25.26■■□□□ 1.63
SMARCC1Q92922 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC25.26■■□□□ 1.63
SMARCC1Q92922 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC25.25■■□□□ 1.63
SMARCC1Q92922 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC25.25■■□□□ 1.63
SMARCC1Q92922 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
SMARCC1Q92922 DERL1-203ENST00000419562 918 ntTSL 2 BASIC25.25■■□□□ 1.63
SMARCC1Q92922 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC25.25■■□□□ 1.63
SMARCC1Q92922 KRT18P48-201ENST00000434763 852 ntBASIC25.25■■□□□ 1.63
SMARCC1Q92922 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC25.25■■□□□ 1.63
SMARCC1Q92922 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC25.25■■□□□ 1.63
SMARCC1Q92922 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC25.25■■□□□ 1.63
SMARCC1Q92922 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC25.25■■□□□ 1.63
SMARCC1Q92922 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC25.25■■□□□ 1.63
SMARCC1Q92922 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC25.25■■□□□ 1.63
SMARCC1Q92922 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC25.25■■□□□ 1.63
SMARCC1Q92922 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC25.25■■□□□ 1.63
SMARCC1Q92922 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC25.25■■□□□ 1.63
SMARCC1Q92922 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC25.25■■□□□ 1.63
SMARCC1Q92922 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC25.25■■□□□ 1.63
SMARCC1Q92922 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC25.25■■□□□ 1.63
SMARCC1Q92922 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC25.24■■□□□ 1.63
SMARCC1Q92922 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
SMARCC1Q92922 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC25.24■■□□□ 1.63
SMARCC1Q92922 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC25.24■■□□□ 1.63
SMARCC1Q92922 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
SMARCC1Q92922 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
SMARCC1Q92922 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC25.24■■□□□ 1.63
SMARCC1Q92922 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
SMARCC1Q92922 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC25.24■■□□□ 1.63
SMARCC1Q92922 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
SMARCC1Q92922 FEM1AP4-201ENST00000443167 1987 ntBASIC25.24■■□□□ 1.63
SMARCC1Q92922 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
SMARCC1Q92922 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC25.23■■□□□ 1.63
SMARCC1Q92922 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC25.23■■□□□ 1.63
SMARCC1Q92922 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
SMARCC1Q92922 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC25.23■■□□□ 1.63
SMARCC1Q92922 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC25.23■■□□□ 1.63
SMARCC1Q92922 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC25.23■■□□□ 1.63
SMARCC1Q92922 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC25.23■■□□□ 1.63
SMARCC1Q92922 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC25.23■■□□□ 1.63
SMARCC1Q92922 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
SMARCC1Q92922 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
SMARCC1Q92922 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
SMARCC1Q92922 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC25.23■■□□□ 1.63
SMARCC1Q92922 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
SMARCC1Q92922 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC25.22■■□□□ 1.63
SMARCC1Q92922 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC25.22■■□□□ 1.63
SMARCC1Q92922 IER3-202ENST00000376377 1350 ntBASIC25.22■■□□□ 1.63
SMARCC1Q92922 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC25.22■■□□□ 1.63
SMARCC1Q92922 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
SMARCC1Q92922 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC25.22■■□□□ 1.63
SMARCC1Q92922 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
SMARCC1Q92922 CA15P1-201ENST00000481698 905 ntBASIC25.22■■□□□ 1.63
SMARCC1Q92922 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC25.22■■□□□ 1.63
SMARCC1Q92922 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
SMARCC1Q92922 AL121894.2-201ENST00000602977 491 ntBASIC25.22■■□□□ 1.63
SMARCC1Q92922 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC25.22■■□□□ 1.63
SMARCC1Q92922 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
SMARCC1Q92922 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC25.22■■□□□ 1.63
SMARCC1Q92922 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC25.22■■□□□ 1.63
SMARCC1Q92922 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
SMARCC1Q92922 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
SMARCC1Q92922 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
SMARCC1Q92922 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
SMARCC1Q92922 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
SMARCC1Q92922 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC25.21■■□□□ 1.63
SMARCC1Q92922 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
SMARCC1Q92922 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
SMARCC1Q92922 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
SMARCC1Q92922 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC25.21■■□□□ 1.63
SMARCC1Q92922 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
SMARCC1Q92922 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC25.21■■□□□ 1.63
SMARCC1Q92922 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
SMARCC1Q92922 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC25.21■■□□□ 1.63
SMARCC1Q92922 GLRB-205ENST00000512619 728 ntTSL 3 BASIC25.21■■□□□ 1.63
SMARCC1Q92922 TMEM179-206ENST00000616017 1645 ntBASIC25.21■■□□□ 1.63
SMARCC1Q92922 BID-212ENST00000614949 1988 ntTSL 5 BASIC25.21■■□□□ 1.63
SMARCC1Q92922 AC012676.1-201ENST00000574705 1949 ntBASIC25.21■■□□□ 1.63
SMARCC1Q92922 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
SMARCC1Q92922 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC25.2■■□□□ 1.63
SMARCC1Q92922 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC25.2■■□□□ 1.63
SMARCC1Q92922 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.63
SMARCC1Q92922 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC25.2■■□□□ 1.63
SMARCC1Q92922 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC25.2■■□□□ 1.62
SMARCC1Q92922 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
SMARCC1Q92922 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC25.2■■□□□ 1.62
SMARCC1Q92922 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC25.2■■□□□ 1.62
SMARCC1Q92922 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC25.2■■□□□ 1.62
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms