Protein–RNA interactions for Protein: Q92834

RPGR, X-linked retinitis pigmentosa GTPase regulator, humanhuman

Known RBP Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRQ92834 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
RPGRQ92834 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
RPGRQ92834 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC24.3■■□□□ 1.48
RPGRQ92834 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC24.3■■□□□ 1.48
RPGRQ92834 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC24.3■■□□□ 1.48
RPGRQ92834 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC24.3■■□□□ 1.48
RPGRQ92834 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC24.3■■□□□ 1.48
RPGRQ92834 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC24.3■■□□□ 1.48
RPGRQ92834 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC24.3■■□□□ 1.48
RPGRQ92834 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC24.3■■□□□ 1.48
RPGRQ92834 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC24.3■■□□□ 1.48
RPGRQ92834 AC139887.4-201ENST00000607877 719 ntBASIC24.3■■□□□ 1.48
RPGRQ92834 AL358472.4-201ENST00000633140 710 ntBASIC24.3■■□□□ 1.48
RPGRQ92834 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
RPGRQ92834 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
RPGRQ92834 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
RPGRQ92834 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC24.3■■□□□ 1.48
RPGRQ92834 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC24.3■■□□□ 1.48
RPGRQ92834 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
RPGRQ92834 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC24.29■■□□□ 1.48
RPGRQ92834 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC24.29■■□□□ 1.48
RPGRQ92834 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC24.29■■□□□ 1.48
RPGRQ92834 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
RPGRQ92834 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
RPGRQ92834 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC24.29■■□□□ 1.48
RPGRQ92834 UPK3BP1-201ENST00000428678 509 ntBASIC24.29■■□□□ 1.48
RPGRQ92834 SLC25A1P2-201ENST00000430693 912 ntBASIC24.29■■□□□ 1.48
RPGRQ92834 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC24.29■■□□□ 1.48
RPGRQ92834 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC24.29■■□□□ 1.48
RPGRQ92834 AC091076.1-201ENST00000610741 619 ntBASIC24.29■■□□□ 1.48
RPGRQ92834 AL138966.2-201ENST00000621997 464 ntBASIC24.29■■□□□ 1.48
RPGRQ92834 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC24.29■■□□□ 1.48
RPGRQ92834 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC24.29■■□□□ 1.48
RPGRQ92834 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC24.29■■□□□ 1.48
RPGRQ92834 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
RPGRQ92834 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC24.29■■□□□ 1.48
RPGRQ92834 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC24.29■■□□□ 1.48
RPGRQ92834 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
RPGRQ92834 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC24.28■■□□□ 1.48
RPGRQ92834 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC24.28■■□□□ 1.48
RPGRQ92834 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
RPGRQ92834 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
RPGRQ92834 RNF152P1-201ENST00000397754 604 ntBASIC24.28■■□□□ 1.48
RPGRQ92834 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC24.28■■□□□ 1.48
RPGRQ92834 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
RPGRQ92834 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC24.28■■□□□ 1.48
RPGRQ92834 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC24.28■■□□□ 1.48
RPGRQ92834 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC24.28■■□□□ 1.48
RPGRQ92834 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC24.28■■□□□ 1.48
RPGRQ92834 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
RPGRQ92834 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC24.28■■□□□ 1.48
RPGRQ92834 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
RPGRQ92834 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC24.28■■□□□ 1.48
RPGRQ92834 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
RPGRQ92834 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC24.28■■□□□ 1.48
RPGRQ92834 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
RPGRQ92834 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
RPGRQ92834 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC24.28■■□□□ 1.48
RPGRQ92834 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
RPGRQ92834 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
RPGRQ92834 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
RPGRQ92834 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC24.27■■□□□ 1.48
RPGRQ92834 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC24.27■■□□□ 1.48
RPGRQ92834 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC24.27■■□□□ 1.48
RPGRQ92834 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
RPGRQ92834 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC24.27■■□□□ 1.48
RPGRQ92834 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC24.27■■□□□ 1.48
RPGRQ92834 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC24.27■■□□□ 1.48
RPGRQ92834 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC24.27■■□□□ 1.48
RPGRQ92834 AC091390.4-202ENST00000476426 537 ntBASIC24.27■■□□□ 1.48
RPGRQ92834 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC24.27■■□□□ 1.48
RPGRQ92834 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
RPGRQ92834 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC24.27■■□□□ 1.48
RPGRQ92834 USF2-205ENST00000594064 1179 ntTSL 2 BASIC24.27■■□□□ 1.48
RPGRQ92834 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC24.27■■□□□ 1.48
RPGRQ92834 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
RPGRQ92834 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC24.27■■□□□ 1.48
RPGRQ92834 TMEM179-206ENST00000616017 1645 ntBASIC24.27■■□□□ 1.48
RPGRQ92834 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
RPGRQ92834 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC24.26■■□□□ 1.47
RPGRQ92834 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
RPGRQ92834 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC24.26■■□□□ 1.47
RPGRQ92834 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC24.26■■□□□ 1.47
RPGRQ92834 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
RPGRQ92834 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC24.26■■□□□ 1.47
RPGRQ92834 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC24.26■■□□□ 1.47
RPGRQ92834 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC24.26■■□□□ 1.47
RPGRQ92834 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
RPGRQ92834 FAM8A6P-201ENST00000407496 1135 ntBASIC24.26■■□□□ 1.47
RPGRQ92834 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC24.26■■□□□ 1.47
RPGRQ92834 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC24.26■■□□□ 1.47
RPGRQ92834 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
RPGRQ92834 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC24.26■■□□□ 1.47
RPGRQ92834 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
RPGRQ92834 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
RPGRQ92834 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
RPGRQ92834 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
RPGRQ92834 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
RPGRQ92834 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC24.26■■□□□ 1.47
RPGRQ92834 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms