Protein–RNA interactions for Protein: Q92529

SHC3, SHC-transforming protein 3, humanhuman

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC3Q92529 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SHC3Q92529 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
SHC3Q92529 AC005332.7-201ENST00000614046 2005 ntBASIC21■□□□□ 0.95
SHC3Q92529 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SHC3Q92529 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SHC3Q92529 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC21■□□□□ 0.95
SHC3Q92529 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC21■□□□□ 0.95
SHC3Q92529 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
SHC3Q92529 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SHC3Q92529 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
SHC3Q92529 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC21■□□□□ 0.95
SHC3Q92529 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
SHC3Q92529 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC21■□□□□ 0.95
SHC3Q92529 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC21■□□□□ 0.95
SHC3Q92529 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC21■□□□□ 0.95
SHC3Q92529 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC21■□□□□ 0.95
SHC3Q92529 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC21■□□□□ 0.95
SHC3Q92529 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC21■□□□□ 0.95
SHC3Q92529 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC21■□□□□ 0.95
SHC3Q92529 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SHC3Q92529 Z82202.1-201ENST00000623446 1880 ntBASIC21■□□□□ 0.95
SHC3Q92529 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
SHC3Q92529 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC21■□□□□ 0.95
SHC3Q92529 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
SHC3Q92529 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC20.99■□□□□ 0.95
SHC3Q92529 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
SHC3Q92529 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SHC3Q92529 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SHC3Q92529 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC20.99■□□□□ 0.95
SHC3Q92529 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SHC3Q92529 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SHC3Q92529 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SHC3Q92529 AL121829.2-201ENST00000620908 328 ntBASIC20.99■□□□□ 0.95
SHC3Q92529 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SHC3Q92529 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SHC3Q92529 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
SHC3Q92529 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SHC3Q92529 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
SHC3Q92529 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SHC3Q92529 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SHC3Q92529 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SHC3Q92529 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SHC3Q92529 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
SHC3Q92529 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SHC3Q92529 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
SHC3Q92529 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SHC3Q92529 GAS7-202ENST00000396115 929 ntTSL 5 BASIC20.98■□□□□ 0.95
SHC3Q92529 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC20.98■□□□□ 0.95
SHC3Q92529 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC20.98■□□□□ 0.95
SHC3Q92529 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC20.98■□□□□ 0.95
SHC3Q92529 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC20.98■□□□□ 0.95
SHC3Q92529 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SHC3Q92529 AC008403.3-201ENST00000598924 454 ntBASIC20.98■□□□□ 0.95
SHC3Q92529 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
SHC3Q92529 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC20.98■□□□□ 0.95
SHC3Q92529 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC20.98■□□□□ 0.95
SHC3Q92529 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC20.98■□□□□ 0.95
SHC3Q92529 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC20.98■□□□□ 0.95
SHC3Q92529 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SHC3Q92529 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
SHC3Q92529 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SHC3Q92529 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SHC3Q92529 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
SHC3Q92529 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SHC3Q92529 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
SHC3Q92529 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SHC3Q92529 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC20.97■□□□□ 0.95
SHC3Q92529 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SHC3Q92529 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC20.97■□□□□ 0.95
SHC3Q92529 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SHC3Q92529 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SHC3Q92529 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC20.97■□□□□ 0.95
SHC3Q92529 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC20.97■□□□□ 0.95
SHC3Q92529 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SHC3Q92529 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SHC3Q92529 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC20.97■□□□□ 0.95
SHC3Q92529 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC20.97■□□□□ 0.95
SHC3Q92529 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC20.97■□□□□ 0.95
SHC3Q92529 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC20.97■□□□□ 0.95
SHC3Q92529 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC20.97■□□□□ 0.95
SHC3Q92529 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC20.97■□□□□ 0.95
SHC3Q92529 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SHC3Q92529 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC20.97■□□□□ 0.95
SHC3Q92529 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SHC3Q92529 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC20.97■□□□□ 0.95
SHC3Q92529 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SHC3Q92529 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SHC3Q92529 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SHC3Q92529 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SHC3Q92529 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SHC3Q92529 GOLGA6L3-201ENST00000507199 1679 ntBASIC20.96■□□□□ 0.95
SHC3Q92529 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
SHC3Q92529 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC20.96■□□□□ 0.95
SHC3Q92529 POM121L13P-201ENST00000422362 380 ntBASIC20.96■□□□□ 0.95
SHC3Q92529 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC20.96■□□□□ 0.95
SHC3Q92529 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC20.96■□□□□ 0.95
SHC3Q92529 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC20.96■□□□□ 0.95
SHC3Q92529 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC20.96■□□□□ 0.95
SHC3Q92529 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC20.96■□□□□ 0.95
SHC3Q92529 PNN-205ENST00000556530 601 ntTSL 2 BASIC20.96■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms