Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
SYNE2Q8WXH0 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC8.05□□□□□ -1.12
SYNE2Q8WXH0 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC8.05□□□□□ -1.12
SYNE2Q8WXH0 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC8.05□□□□□ -1.12
SYNE2Q8WXH0 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC8.05□□□□□ -1.12
SYNE2Q8WXH0 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC8.05□□□□□ -1.12
SYNE2Q8WXH0 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC8.05□□□□□ -1.12
SYNE2Q8WXH0 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
SYNE2Q8WXH0 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
SYNE2Q8WXH0 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
SYNE2Q8WXH0 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
SYNE2Q8WXH0 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC8.05□□□□□ -1.12
SYNE2Q8WXH0 LINC00526-201ENST00000581067 1875 ntBASIC8.05□□□□□ -1.12
SYNE2Q8WXH0 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC8.05□□□□□ -1.12
SYNE2Q8WXH0 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
SYNE2Q8WXH0 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC8.05□□□□□ -1.12
SYNE2Q8WXH0 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
SYNE2Q8WXH0 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC8.05□□□□□ -1.12
SYNE2Q8WXH0 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC8.05□□□□□ -1.12
SYNE2Q8WXH0 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
SYNE2Q8WXH0 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
SYNE2Q8WXH0 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC8.05□□□□□ -1.12
SYNE2Q8WXH0 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
SYNE2Q8WXH0 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
SYNE2Q8WXH0 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
SYNE2Q8WXH0 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC8.05□□□□□ -1.12
SYNE2Q8WXH0 DDT-203ENST00000403754 569 ntTSL 3 BASIC8.05□□□□□ -1.12
SYNE2Q8WXH0 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC8.05□□□□□ -1.12
SYNE2Q8WXH0 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC8.05□□□□□ -1.12
SYNE2Q8WXH0 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC8.05□□□□□ -1.12
SYNE2Q8WXH0 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
SYNE2Q8WXH0 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC8.05□□□□□ -1.12
SYNE2Q8WXH0 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
SYNE2Q8WXH0 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC8.05□□□□□ -1.12
SYNE2Q8WXH0 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC8.05□□□□□ -1.12
SYNE2Q8WXH0 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC8.05□□□□□ -1.12
SYNE2Q8WXH0 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC8.04□□□□□ -1.12
SYNE2Q8WXH0 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
SYNE2Q8WXH0 STARP1-201ENST00000397973 869 ntBASIC8.04□□□□□ -1.12
SYNE2Q8WXH0 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC8.04□□□□□ -1.12
SYNE2Q8WXH0 IGHV3OR16-7-201ENST00000604106 360 ntBASIC8.04□□□□□ -1.12
SYNE2Q8WXH0 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC8.04□□□□□ -1.12
SYNE2Q8WXH0 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC8.04□□□□□ -1.12
SYNE2Q8WXH0 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
SYNE2Q8WXH0 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC8.04□□□□□ -1.12
SYNE2Q8WXH0 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC8.04□□□□□ -1.12
SYNE2Q8WXH0 CNN2P11-201ENST00000429351 262 ntBASIC8.04□□□□□ -1.12
SYNE2Q8WXH0 TK1-205ENST00000590862 642 ntTSL 3 BASIC8.04□□□□□ -1.12
SYNE2Q8WXH0 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC8.04□□□□□ -1.12
SYNE2Q8WXH0 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
SYNE2Q8WXH0 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
SYNE2Q8WXH0 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC8.04□□□□□ -1.12
SYNE2Q8WXH0 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC8.04□□□□□ -1.12
SYNE2Q8WXH0 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
SYNE2Q8WXH0 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
SYNE2Q8WXH0 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC8.04□□□□□ -1.12
SYNE2Q8WXH0 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
SYNE2Q8WXH0 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC8.04□□□□□ -1.12
SYNE2Q8WXH0 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC8.04□□□□□ -1.12
SYNE2Q8WXH0 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC8.04□□□□□ -1.12
SYNE2Q8WXH0 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC8.04□□□□□ -1.12
SYNE2Q8WXH0 AC008687.5-201ENST00000593746 558 ntBASIC8.04□□□□□ -1.12
SYNE2Q8WXH0 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC8.04□□□□□ -1.12
SYNE2Q8WXH0 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC8.04□□□□□ -1.12
SYNE2Q8WXH0 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC8.04□□□□□ -1.12
SYNE2Q8WXH0 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC8.04□□□□□ -1.12
SYNE2Q8WXH0 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
SYNE2Q8WXH0 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC8.04□□□□□ -1.12
SYNE2Q8WXH0 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
SYNE2Q8WXH0 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC8.04□□□□□ -1.12
SYNE2Q8WXH0 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
SYNE2Q8WXH0 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC8.04□□□□□ -1.12
SYNE2Q8WXH0 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC8.04□□□□□ -1.12
SYNE2Q8WXH0 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
SYNE2Q8WXH0 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC8.04□□□□□ -1.12
SYNE2Q8WXH0 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
SYNE2Q8WXH0 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC8.04□□□□□ -1.12
SYNE2Q8WXH0 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC8.04□□□□□ -1.12
SYNE2Q8WXH0 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC8.03□□□□□ -1.12
SYNE2Q8WXH0 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC8.03□□□□□ -1.12
SYNE2Q8WXH0 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
SYNE2Q8WXH0 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
SYNE2Q8WXH0 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
SYNE2Q8WXH0 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC8.03□□□□□ -1.12
SYNE2Q8WXH0 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
SYNE2Q8WXH0 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC8.03□□□□□ -1.12
SYNE2Q8WXH0 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
SYNE2Q8WXH0 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC8.03□□□□□ -1.12
SYNE2Q8WXH0 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
SYNE2Q8WXH0 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
SYNE2Q8WXH0 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC8.03□□□□□ -1.12
SYNE2Q8WXH0 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
SYNE2Q8WXH0 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
SYNE2Q8WXH0 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC8.03□□□□□ -1.12
SYNE2Q8WXH0 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC8.03□□□□□ -1.12
SYNE2Q8WXH0 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC8.03□□□□□ -1.12
SYNE2Q8WXH0 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
SYNE2Q8WXH0 TP73-AS1-207ENST00000624167 988 ntBASIC8.03□□□□□ -1.12
SYNE2Q8WXH0 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC8.03□□□□□ -1.12
SYNE2Q8WXH0 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms