Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
HMGB4Q8WW32 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HMGB4Q8WW32 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HMGB4Q8WW32 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HMGB4Q8WW32 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC19.76■□□□□ 0.75
HMGB4Q8WW32 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
HMGB4Q8WW32 EGLN1P1-201ENST00000531623 762 ntBASIC19.76■□□□□ 0.75
HMGB4Q8WW32 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
HMGB4Q8WW32 SLC25A1P4-201ENST00000567977 778 ntBASIC19.76■□□□□ 0.75
HMGB4Q8WW32 AC087388.1-201ENST00000571370 1112 ntBASIC19.76■□□□□ 0.75
HMGB4Q8WW32 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC19.76■□□□□ 0.75
HMGB4Q8WW32 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC19.76■□□□□ 0.75
HMGB4Q8WW32 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HMGB4Q8WW32 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
HMGB4Q8WW32 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
HMGB4Q8WW32 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HMGB4Q8WW32 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC19.75■□□□□ 0.75
HMGB4Q8WW32 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
HMGB4Q8WW32 EFS-203ENST00000429593 2610 ntTSL 2 BASIC19.75■□□□□ 0.75
HMGB4Q8WW32 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
HMGB4Q8WW32 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HMGB4Q8WW32 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
HMGB4Q8WW32 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HMGB4Q8WW32 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HMGB4Q8WW32 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC19.75■□□□□ 0.75
HMGB4Q8WW32 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC19.75■□□□□ 0.75
HMGB4Q8WW32 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC19.75■□□□□ 0.75
HMGB4Q8WW32 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HMGB4Q8WW32 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC19.75■□□□□ 0.75
HMGB4Q8WW32 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
HMGB4Q8WW32 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HMGB4Q8WW32 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC19.75■□□□□ 0.75
HMGB4Q8WW32 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC19.75■□□□□ 0.75
HMGB4Q8WW32 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HMGB4Q8WW32 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC19.75■□□□□ 0.75
HMGB4Q8WW32 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HMGB4Q8WW32 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
HMGB4Q8WW32 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC19.75■□□□□ 0.75
HMGB4Q8WW32 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC19.75■□□□□ 0.75
HMGB4Q8WW32 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
HMGB4Q8WW32 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
HMGB4Q8WW32 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
HMGB4Q8WW32 USP48-205ENST00000421625 2818 ntTSL 2 BASIC19.74■□□□□ 0.75
HMGB4Q8WW32 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
HMGB4Q8WW32 TSPY14P-201ENST00000303979 915 ntBASIC19.74■□□□□ 0.75
HMGB4Q8WW32 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
HMGB4Q8WW32 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
HMGB4Q8WW32 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HMGB4Q8WW32 FDX2-206ENST00000492239 773 ntTSL 2 BASIC19.74■□□□□ 0.75
HMGB4Q8WW32 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
HMGB4Q8WW32 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
HMGB4Q8WW32 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
HMGB4Q8WW32 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
HMGB4Q8WW32 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HMGB4Q8WW32 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
HMGB4Q8WW32 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
HMGB4Q8WW32 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HMGB4Q8WW32 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC19.73■□□□□ 0.75
HMGB4Q8WW32 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
HMGB4Q8WW32 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
HMGB4Q8WW32 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
HMGB4Q8WW32 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
HMGB4Q8WW32 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
HMGB4Q8WW32 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HMGB4Q8WW32 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC19.73■□□□□ 0.75
HMGB4Q8WW32 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC19.73■□□□□ 0.75
HMGB4Q8WW32 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC19.73■□□□□ 0.75
HMGB4Q8WW32 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC19.73■□□□□ 0.75
HMGB4Q8WW32 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HMGB4Q8WW32 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC19.73■□□□□ 0.75
HMGB4Q8WW32 AC128688.1-201ENST00000487626 519 ntBASIC19.73■□□□□ 0.75
HMGB4Q8WW32 CYGB-204ENST00000589342 815 ntTSL 3 BASIC19.73■□□□□ 0.75
HMGB4Q8WW32 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
HMGB4Q8WW32 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC19.73■□□□□ 0.75
HMGB4Q8WW32 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.73■□□□□ 0.75
HMGB4Q8WW32 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
HMGB4Q8WW32 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
HMGB4Q8WW32 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HMGB4Q8WW32 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
HMGB4Q8WW32 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC19.72■□□□□ 0.75
HMGB4Q8WW32 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HMGB4Q8WW32 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
HMGB4Q8WW32 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
HMGB4Q8WW32 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HMGB4Q8WW32 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HMGB4Q8WW32 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
HMGB4Q8WW32 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
HMGB4Q8WW32 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HMGB4Q8WW32 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
HMGB4Q8WW32 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HMGB4Q8WW32 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC19.72■□□□□ 0.75
HMGB4Q8WW32 WWOX-216ENST00000569818 525 ntBASIC19.72■□□□□ 0.75
HMGB4Q8WW32 SMG8-203ENST00000578922 2178 ntBASIC19.72■□□□□ 0.75
HMGB4Q8WW32 AC011298.2-201ENST00000617989 482 ntBASIC19.72■□□□□ 0.75
HMGB4Q8WW32 AC006011.2-201ENST00000621313 1158 ntBASIC19.72■□□□□ 0.75
HMGB4Q8WW32 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
HMGB4Q8WW32 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC19.72■□□□□ 0.75
HMGB4Q8WW32 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HMGB4Q8WW32 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
HMGB4Q8WW32 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms