Protein–RNA interactions for Protein: Q8TD47

RPS4Y2, 40S ribosomal protein S4, Y isoform 2, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4Y2Q8TD47 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC17.21■□□□□ 0.35
RPS4Y2Q8TD47 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RPS4Y2Q8TD47 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC17.21■□□□□ 0.35
RPS4Y2Q8TD47 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC17.21■□□□□ 0.35
RPS4Y2Q8TD47 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RPS4Y2Q8TD47 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RPS4Y2Q8TD47 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
RPS4Y2Q8TD47 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RPS4Y2Q8TD47 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RPS4Y2Q8TD47 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
RPS4Y2Q8TD47 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
RPS4Y2Q8TD47 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
RPS4Y2Q8TD47 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC17.2■□□□□ 0.34
RPS4Y2Q8TD47 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
RPS4Y2Q8TD47 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RPS4Y2Q8TD47 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RPS4Y2Q8TD47 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
RPS4Y2Q8TD47 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
RPS4Y2Q8TD47 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RPS4Y2Q8TD47 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RPS4Y2Q8TD47 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC17.2■□□□□ 0.34
RPS4Y2Q8TD47 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RPS4Y2Q8TD47 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
RPS4Y2Q8TD47 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
RPS4Y2Q8TD47 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
RPS4Y2Q8TD47 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RPS4Y2Q8TD47 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC17.2■□□□□ 0.34
RPS4Y2Q8TD47 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
RPS4Y2Q8TD47 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RPS4Y2Q8TD47 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RPS4Y2Q8TD47 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RPS4Y2Q8TD47 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
RPS4Y2Q8TD47 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC17.2■□□□□ 0.34
RPS4Y2Q8TD47 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RPS4Y2Q8TD47 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RPS4Y2Q8TD47 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
RPS4Y2Q8TD47 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC17.2■□□□□ 0.34
RPS4Y2Q8TD47 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RPS4Y2Q8TD47 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
RPS4Y2Q8TD47 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RPS4Y2Q8TD47 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RPS4Y2Q8TD47 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC17.19■□□□□ 0.34
RPS4Y2Q8TD47 NEFHP1-201ENST00000412845 2629 ntBASIC17.19■□□□□ 0.34
RPS4Y2Q8TD47 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
RPS4Y2Q8TD47 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RPS4Y2Q8TD47 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
RPS4Y2Q8TD47 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
RPS4Y2Q8TD47 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC17.19■□□□□ 0.34
RPS4Y2Q8TD47 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC17.19■□□□□ 0.34
RPS4Y2Q8TD47 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RPS4Y2Q8TD47 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC17.19■□□□□ 0.34
RPS4Y2Q8TD47 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
RPS4Y2Q8TD47 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC17.19■□□□□ 0.34
RPS4Y2Q8TD47 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC17.19■□□□□ 0.34
RPS4Y2Q8TD47 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC17.19■□□□□ 0.34
RPS4Y2Q8TD47 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC17.19■□□□□ 0.34
RPS4Y2Q8TD47 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
RPS4Y2Q8TD47 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RPS4Y2Q8TD47 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RPS4Y2Q8TD47 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RPS4Y2Q8TD47 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RPS4Y2Q8TD47 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC17.19■□□□□ 0.34
RPS4Y2Q8TD47 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
RPS4Y2Q8TD47 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
RPS4Y2Q8TD47 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
RPS4Y2Q8TD47 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RPS4Y2Q8TD47 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RPS4Y2Q8TD47 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RPS4Y2Q8TD47 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC17.18■□□□□ 0.34
RPS4Y2Q8TD47 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RPS4Y2Q8TD47 AL161938.1-201ENST00000569833 2180 ntBASIC17.18■□□□□ 0.34
RPS4Y2Q8TD47 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
RPS4Y2Q8TD47 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RPS4Y2Q8TD47 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
RPS4Y2Q8TD47 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
RPS4Y2Q8TD47 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC17.18■□□□□ 0.34
RPS4Y2Q8TD47 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC17.18■□□□□ 0.34
RPS4Y2Q8TD47 BMP1-204ENST00000397814 836 ntTSL 4 BASIC17.18■□□□□ 0.34
RPS4Y2Q8TD47 CNN2P6-201ENST00000439038 900 ntBASIC17.18■□□□□ 0.34
RPS4Y2Q8TD47 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RPS4Y2Q8TD47 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
RPS4Y2Q8TD47 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC17.18■□□□□ 0.34
RPS4Y2Q8TD47 AC022517.1-201ENST00000592429 346 ntBASIC17.18■□□□□ 0.34
RPS4Y2Q8TD47 CYP2T3P-201ENST00000601990 817 ntBASIC17.18■□□□□ 0.34
RPS4Y2Q8TD47 AL137784.2-201ENST00000607332 1000 ntBASIC17.18■□□□□ 0.34
RPS4Y2Q8TD47 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
RPS4Y2Q8TD47 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RPS4Y2Q8TD47 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RPS4Y2Q8TD47 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RPS4Y2Q8TD47 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
RPS4Y2Q8TD47 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RPS4Y2Q8TD47 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC17.18■□□□□ 0.34
RPS4Y2Q8TD47 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RPS4Y2Q8TD47 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
RPS4Y2Q8TD47 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
RPS4Y2Q8TD47 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
RPS4Y2Q8TD47 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC17.18■□□□□ 0.34
RPS4Y2Q8TD47 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
RPS4Y2Q8TD47 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RPS4Y2Q8TD47 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms