Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 MIR4651-201ENST00000582622 73 ntBASIC17.21■□□□□ 0.35
CPEB3Q8NE35 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC17.21■□□□□ 0.35
CPEB3Q8NE35 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
CPEB3Q8NE35 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC17.21■□□□□ 0.35
CPEB3Q8NE35 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CPEB3Q8NE35 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CPEB3Q8NE35 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
CPEB3Q8NE35 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC17.21■□□□□ 0.34
CPEB3Q8NE35 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
CPEB3Q8NE35 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.34
CPEB3Q8NE35 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CPEB3Q8NE35 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC17.2■□□□□ 0.34
CPEB3Q8NE35 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC17.2■□□□□ 0.34
CPEB3Q8NE35 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
CPEB3Q8NE35 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CPEB3Q8NE35 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CPEB3Q8NE35 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
CPEB3Q8NE35 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CPEB3Q8NE35 ESRRAP1-201ENST00000400596 1257 ntBASIC17.2■□□□□ 0.34
CPEB3Q8NE35 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CPEB3Q8NE35 POM121L13P-201ENST00000422362 380 ntBASIC17.2■□□□□ 0.34
CPEB3Q8NE35 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC17.2■□□□□ 0.34
CPEB3Q8NE35 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC17.2■□□□□ 0.34
CPEB3Q8NE35 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
CPEB3Q8NE35 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CPEB3Q8NE35 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC17.2■□□□□ 0.34
CPEB3Q8NE35 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CPEB3Q8NE35 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
CPEB3Q8NE35 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
CPEB3Q8NE35 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
CPEB3Q8NE35 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC17.2■□□□□ 0.34
CPEB3Q8NE35 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC17.2■□□□□ 0.34
CPEB3Q8NE35 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CPEB3Q8NE35 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
CPEB3Q8NE35 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CPEB3Q8NE35 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CPEB3Q8NE35 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
CPEB3Q8NE35 TFP1-202ENST00000475455 1573 ntBASIC17.19■□□□□ 0.34
CPEB3Q8NE35 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC17.19■□□□□ 0.34
CPEB3Q8NE35 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC17.19■□□□□ 0.34
CPEB3Q8NE35 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CPEB3Q8NE35 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
CPEB3Q8NE35 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CPEB3Q8NE35 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CPEB3Q8NE35 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC17.19■□□□□ 0.34
CPEB3Q8NE35 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CPEB3Q8NE35 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
CPEB3Q8NE35 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CPEB3Q8NE35 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
CPEB3Q8NE35 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CPEB3Q8NE35 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CPEB3Q8NE35 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
CPEB3Q8NE35 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC17.19■□□□□ 0.34
CPEB3Q8NE35 THEM4-205ENST00000489410 643 ntTSL 2 BASIC17.19■□□□□ 0.34
CPEB3Q8NE35 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC17.19■□□□□ 0.34
CPEB3Q8NE35 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CPEB3Q8NE35 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
CPEB3Q8NE35 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CPEB3Q8NE35 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
CPEB3Q8NE35 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
CPEB3Q8NE35 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC17.19■□□□□ 0.34
CPEB3Q8NE35 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CPEB3Q8NE35 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CPEB3Q8NE35 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CPEB3Q8NE35 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC17.19■□□□□ 0.34
CPEB3Q8NE35 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC17.19■□□□□ 0.34
CPEB3Q8NE35 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CPEB3Q8NE35 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CPEB3Q8NE35 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CPEB3Q8NE35 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CPEB3Q8NE35 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
CPEB3Q8NE35 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC17.18■□□□□ 0.34
CPEB3Q8NE35 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
CPEB3Q8NE35 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CPEB3Q8NE35 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CPEB3Q8NE35 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CPEB3Q8NE35 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
CPEB3Q8NE35 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CPEB3Q8NE35 MAX-217ENST00000557277 728 ntTSL 3 BASIC17.18■□□□□ 0.34
CPEB3Q8NE35 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CPEB3Q8NE35 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CPEB3Q8NE35 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CPEB3Q8NE35 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
CPEB3Q8NE35 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CPEB3Q8NE35 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CPEB3Q8NE35 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CPEB3Q8NE35 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CPEB3Q8NE35 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC17.18■□□□□ 0.34
CPEB3Q8NE35 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC17.18■□□□□ 0.34
CPEB3Q8NE35 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC17.18■□□□□ 0.34
CPEB3Q8NE35 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC17.18■□□□□ 0.34
CPEB3Q8NE35 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CPEB3Q8NE35 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CPEB3Q8NE35 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC17.17■□□□□ 0.34
CPEB3Q8NE35 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC17.17■□□□□ 0.34
CPEB3Q8NE35 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC17.17■□□□□ 0.34
CPEB3Q8NE35 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
CPEB3Q8NE35 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
CPEB3Q8NE35 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
CPEB3Q8NE35 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms