Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
ZNF439Q8NDP4 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC16.28■□□□□ 0.2
ZNF439Q8NDP4 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC16.28■□□□□ 0.2
ZNF439Q8NDP4 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ZNF439Q8NDP4 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC16.28■□□□□ 0.2
ZNF439Q8NDP4 OR2A1-AS1-201ENST00000462305 773 ntBASIC16.28■□□□□ 0.2
ZNF439Q8NDP4 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC16.28■□□□□ 0.2
ZNF439Q8NDP4 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
ZNF439Q8NDP4 WT1-AS_3.1-201ENST00000613262 234 ntBASIC16.28■□□□□ 0.2
ZNF439Q8NDP4 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
ZNF439Q8NDP4 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC16.28■□□□□ 0.2
ZNF439Q8NDP4 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC16.28■□□□□ 0.2
ZNF439Q8NDP4 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC16.28■□□□□ 0.2
ZNF439Q8NDP4 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ZNF439Q8NDP4 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC16.28■□□□□ 0.2
ZNF439Q8NDP4 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ZNF439Q8NDP4 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC16.28■□□□□ 0.2
ZNF439Q8NDP4 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC16.28■□□□□ 0.2
ZNF439Q8NDP4 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ZNF439Q8NDP4 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ZNF439Q8NDP4 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ZNF439Q8NDP4 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
ZNF439Q8NDP4 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
ZNF439Q8NDP4 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC16.27■□□□□ 0.2
ZNF439Q8NDP4 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
ZNF439Q8NDP4 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC16.27■□□□□ 0.2
ZNF439Q8NDP4 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
ZNF439Q8NDP4 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC16.27■□□□□ 0.2
ZNF439Q8NDP4 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC16.27■□□□□ 0.2
ZNF439Q8NDP4 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
ZNF439Q8NDP4 DUSP5P2-201ENST00000426873 1033 ntBASIC16.27■□□□□ 0.2
ZNF439Q8NDP4 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
ZNF439Q8NDP4 NME6-213ENST00000451657 871 ntTSL 2 BASIC16.27■□□□□ 0.2
ZNF439Q8NDP4 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC16.27■□□□□ 0.2
ZNF439Q8NDP4 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC16.27■□□□□ 0.2
ZNF439Q8NDP4 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC16.27■□□□□ 0.2
ZNF439Q8NDP4 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
ZNF439Q8NDP4 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC16.27■□□□□ 0.2
ZNF439Q8NDP4 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
ZNF439Q8NDP4 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC16.27■□□□□ 0.19
ZNF439Q8NDP4 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
ZNF439Q8NDP4 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
ZNF439Q8NDP4 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
ZNF439Q8NDP4 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.19
ZNF439Q8NDP4 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
ZNF439Q8NDP4 STK25-204ENST00000405585 1643 ntTSL 2 BASIC16.27■□□□□ 0.19
ZNF439Q8NDP4 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
ZNF439Q8NDP4 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC16.26■□□□□ 0.19
ZNF439Q8NDP4 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ZNF439Q8NDP4 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ZNF439Q8NDP4 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
ZNF439Q8NDP4 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
ZNF439Q8NDP4 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ZNF439Q8NDP4 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ZNF439Q8NDP4 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ZNF439Q8NDP4 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ZNF439Q8NDP4 SLC29A4P1-201ENST00000398760 971 ntBASIC16.26■□□□□ 0.19
ZNF439Q8NDP4 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ZNF439Q8NDP4 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC16.26■□□□□ 0.19
ZNF439Q8NDP4 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC16.26■□□□□ 0.19
ZNF439Q8NDP4 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC16.26■□□□□ 0.19
ZNF439Q8NDP4 TK2-208ENST00000545043 1120 ntTSL 2 BASIC16.26■□□□□ 0.19
ZNF439Q8NDP4 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC16.26■□□□□ 0.19
ZNF439Q8NDP4 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC16.26■□□□□ 0.19
ZNF439Q8NDP4 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ZNF439Q8NDP4 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
ZNF439Q8NDP4 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
ZNF439Q8NDP4 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ZNF439Q8NDP4 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ZNF439Q8NDP4 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
ZNF439Q8NDP4 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC16.26■□□□□ 0.19
ZNF439Q8NDP4 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ZNF439Q8NDP4 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ZNF439Q8NDP4 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ZNF439Q8NDP4 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
ZNF439Q8NDP4 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC16.25■□□□□ 0.19
ZNF439Q8NDP4 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ZNF439Q8NDP4 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC16.25■□□□□ 0.19
ZNF439Q8NDP4 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC16.25■□□□□ 0.19
ZNF439Q8NDP4 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ZNF439Q8NDP4 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC16.25■□□□□ 0.19
ZNF439Q8NDP4 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
ZNF439Q8NDP4 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
ZNF439Q8NDP4 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ZNF439Q8NDP4 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC16.25■□□□□ 0.19
ZNF439Q8NDP4 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC16.25■□□□□ 0.19
ZNF439Q8NDP4 AC091874.3-201ENST00000512672 1195 ntBASIC16.25■□□□□ 0.19
ZNF439Q8NDP4 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
ZNF439Q8NDP4 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC16.25■□□□□ 0.19
ZNF439Q8NDP4 AP001271.2-201ENST00000624018 1556 ntBASIC16.25■□□□□ 0.19
ZNF439Q8NDP4 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ZNF439Q8NDP4 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
ZNF439Q8NDP4 CRK-204ENST00000574295 1391 ntTSL 5 BASIC16.25■□□□□ 0.19
ZNF439Q8NDP4 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
ZNF439Q8NDP4 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
ZNF439Q8NDP4 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
ZNF439Q8NDP4 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ZNF439Q8NDP4 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC16.24■□□□□ 0.19
ZNF439Q8NDP4 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ZNF439Q8NDP4 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 11.1 ms