Protein–RNA interactions for Protein: Q8N328

PGBD3, PiggyBac transposable element-derived protein 3, humanhuman

Predictions only

Length 593 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD3Q8N328 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
PGBD3Q8N328 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC19.97■□□□□ 0.79
PGBD3Q8N328 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.97■□□□□ 0.79
PGBD3Q8N328 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
PGBD3Q8N328 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PGBD3Q8N328 AC005521.1-201ENST00000393351 872 ntBASIC19.97■□□□□ 0.79
PGBD3Q8N328 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.97■□□□□ 0.79
PGBD3Q8N328 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PGBD3Q8N328 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PGBD3Q8N328 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC19.97■□□□□ 0.79
PGBD3Q8N328 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.97■□□□□ 0.79
PGBD3Q8N328 KRT18P35-201ENST00000510488 1269 ntBASIC19.97■□□□□ 0.79
PGBD3Q8N328 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC19.97■□□□□ 0.79
PGBD3Q8N328 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC19.97■□□□□ 0.79
PGBD3Q8N328 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
PGBD3Q8N328 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC19.97■□□□□ 0.79
PGBD3Q8N328 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
PGBD3Q8N328 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PGBD3Q8N328 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PGBD3Q8N328 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC19.97■□□□□ 0.79
PGBD3Q8N328 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
PGBD3Q8N328 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PGBD3Q8N328 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PGBD3Q8N328 AP006587.1-201ENST00000534129 1502 ntBASIC19.97■□□□□ 0.79
PGBD3Q8N328 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
PGBD3Q8N328 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PGBD3Q8N328 PLK5-205ENST00000642079 1969 ntBASIC19.96■□□□□ 0.79
PGBD3Q8N328 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PGBD3Q8N328 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PGBD3Q8N328 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PGBD3Q8N328 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC19.96■□□□□ 0.79
PGBD3Q8N328 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC19.96■□□□□ 0.79
PGBD3Q8N328 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC19.96■□□□□ 0.79
PGBD3Q8N328 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC19.96■□□□□ 0.79
PGBD3Q8N328 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC19.96■□□□□ 0.79
PGBD3Q8N328 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC19.96■□□□□ 0.79
PGBD3Q8N328 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC19.96■□□□□ 0.79
PGBD3Q8N328 NT5C-211ENST00000582170 653 ntTSL 3 BASIC19.96■□□□□ 0.79
PGBD3Q8N328 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PGBD3Q8N328 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PGBD3Q8N328 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC19.96■□□□□ 0.79
PGBD3Q8N328 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PGBD3Q8N328 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PGBD3Q8N328 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
PGBD3Q8N328 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC19.95■□□□□ 0.79
PGBD3Q8N328 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.79
PGBD3Q8N328 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC19.95■□□□□ 0.79
PGBD3Q8N328 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PGBD3Q8N328 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PGBD3Q8N328 H19-201ENST00000411754 1788 ntTSL 5 BASIC19.95■□□□□ 0.78
PGBD3Q8N328 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC19.95■□□□□ 0.78
PGBD3Q8N328 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
PGBD3Q8N328 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PGBD3Q8N328 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PGBD3Q8N328 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC19.95■□□□□ 0.78
PGBD3Q8N328 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC19.95■□□□□ 0.78
PGBD3Q8N328 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PGBD3Q8N328 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC19.95■□□□□ 0.78
PGBD3Q8N328 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC19.95■□□□□ 0.78
PGBD3Q8N328 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC19.95■□□□□ 0.78
PGBD3Q8N328 AL590326.2-201ENST00000625139 305 ntBASIC19.95■□□□□ 0.78
PGBD3Q8N328 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC19.95■□□□□ 0.78
PGBD3Q8N328 KRT18P22-201ENST00000402024 1347 ntBASIC19.95■□□□□ 0.78
PGBD3Q8N328 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PGBD3Q8N328 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
PGBD3Q8N328 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PGBD3Q8N328 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PGBD3Q8N328 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC19.94■□□□□ 0.78
PGBD3Q8N328 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC19.94■□□□□ 0.78
PGBD3Q8N328 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
PGBD3Q8N328 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PGBD3Q8N328 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
PGBD3Q8N328 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PGBD3Q8N328 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PGBD3Q8N328 AL137013.1-201ENST00000432946 1228 ntBASIC19.94■□□□□ 0.78
PGBD3Q8N328 KRT18P57-201ENST00000443599 1254 ntBASIC19.94■□□□□ 0.78
PGBD3Q8N328 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC19.94■□□□□ 0.78
PGBD3Q8N328 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC19.94■□□□□ 0.78
PGBD3Q8N328 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC19.94■□□□□ 0.78
PGBD3Q8N328 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
PGBD3Q8N328 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC19.94■□□□□ 0.78
PGBD3Q8N328 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PGBD3Q8N328 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC19.94■□□□□ 0.78
PGBD3Q8N328 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC19.94■□□□□ 0.78
PGBD3Q8N328 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
PGBD3Q8N328 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
PGBD3Q8N328 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PGBD3Q8N328 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PGBD3Q8N328 DPP3P2-201ENST00000416030 1696 ntBASIC19.94■□□□□ 0.78
PGBD3Q8N328 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PGBD3Q8N328 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PGBD3Q8N328 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
PGBD3Q8N328 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
PGBD3Q8N328 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PGBD3Q8N328 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PGBD3Q8N328 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PGBD3Q8N328 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
PGBD3Q8N328 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC19.93■□□□□ 0.78
PGBD3Q8N328 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
PGBD3Q8N328 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms