Protein–RNA interactions for Protein: Q8N1W1

ARHGEF28, Rho guanine nucleotide exchange factor 28, humanhuman

Known RBP Predictions only

Length 1,705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28Q8N1W1 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC27.39■■□□□ 1.98
ARHGEF28Q8N1W1 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC27.39■■□□□ 1.98
ARHGEF28Q8N1W1 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC27.39■■□□□ 1.98
ARHGEF28Q8N1W1 MFAP1P1-201ENST00000442257 1255 ntBASIC27.39■■□□□ 1.98
ARHGEF28Q8N1W1 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC27.39■■□□□ 1.98
ARHGEF28Q8N1W1 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC27.39■■□□□ 1.98
ARHGEF28Q8N1W1 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC27.39■■□□□ 1.98
ARHGEF28Q8N1W1 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC27.39■■□□□ 1.97
ARHGEF28Q8N1W1 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC27.39■■□□□ 1.97
ARHGEF28Q8N1W1 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC27.39■■□□□ 1.97
ARHGEF28Q8N1W1 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC27.38■■□□□ 1.97
ARHGEF28Q8N1W1 AC004951.3-201ENST00000418645 1148 ntBASIC27.38■■□□□ 1.97
ARHGEF28Q8N1W1 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC27.38■■□□□ 1.97
ARHGEF28Q8N1W1 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC27.38■■□□□ 1.97
ARHGEF28Q8N1W1 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC27.38■■□□□ 1.97
ARHGEF28Q8N1W1 CD37-204ENST00000535669 1674 ntTSL 2 BASIC27.38■■□□□ 1.97
ARHGEF28Q8N1W1 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
ARHGEF28Q8N1W1 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
ARHGEF28Q8N1W1 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC27.38■■□□□ 1.97
ARHGEF28Q8N1W1 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC27.38■■□□□ 1.97
ARHGEF28Q8N1W1 FAM207BP-201ENST00000447172 505 ntBASIC27.38■■□□□ 1.97
ARHGEF28Q8N1W1 LTBR-211ENST00000543190 785 ntTSL 3 BASIC27.38■■□□□ 1.97
ARHGEF28Q8N1W1 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
ARHGEF28Q8N1W1 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
ARHGEF28Q8N1W1 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
ARHGEF28Q8N1W1 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC27.37■■□□□ 1.97
ARHGEF28Q8N1W1 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC27.37■■□□□ 1.97
ARHGEF28Q8N1W1 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
ARHGEF28Q8N1W1 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
ARHGEF28Q8N1W1 HIST1H2APS4-201ENST00000362070 348 ntBASIC27.37■■□□□ 1.97
ARHGEF28Q8N1W1 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC27.37■■□□□ 1.97
ARHGEF28Q8N1W1 DUX4L26-201ENST00000489078 1255 ntBASIC27.37■■□□□ 1.97
ARHGEF28Q8N1W1 NME3-204ENST00000563498 920 ntTSL 2 BASIC27.37■■□□□ 1.97
ARHGEF28Q8N1W1 FAM87A-204ENST00000613235 858 ntBASIC27.37■■□□□ 1.97
ARHGEF28Q8N1W1 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC27.37■■□□□ 1.97
ARHGEF28Q8N1W1 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC27.37■■□□□ 1.97
ARHGEF28Q8N1W1 AL512408.1-201ENST00000569378 2000 ntBASIC27.37■■□□□ 1.97
ARHGEF28Q8N1W1 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC27.37■■□□□ 1.97
ARHGEF28Q8N1W1 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
ARHGEF28Q8N1W1 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC27.37■■□□□ 1.97
ARHGEF28Q8N1W1 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC27.37■■□□□ 1.97
ARHGEF28Q8N1W1 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
ARHGEF28Q8N1W1 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC27.37■■□□□ 1.97
ARHGEF28Q8N1W1 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC27.36■■□□□ 1.97
ARHGEF28Q8N1W1 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC27.36■■□□□ 1.97
ARHGEF28Q8N1W1 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC27.36■■□□□ 1.97
ARHGEF28Q8N1W1 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC27.36■■□□□ 1.97
ARHGEF28Q8N1W1 AC091390.4-202ENST00000476426 537 ntBASIC27.36■■□□□ 1.97
ARHGEF28Q8N1W1 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC27.36■■□□□ 1.97
ARHGEF28Q8N1W1 GRAMD4P8-201ENST00000605465 1115 ntBASIC27.36■■□□□ 1.97
ARHGEF28Q8N1W1 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
ARHGEF28Q8N1W1 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC27.36■■□□□ 1.97
ARHGEF28Q8N1W1 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC27.36■■□□□ 1.97
ARHGEF28Q8N1W1 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC27.36■■□□□ 1.97
ARHGEF28Q8N1W1 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC27.36■■□□□ 1.97
ARHGEF28Q8N1W1 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC27.36■■□□□ 1.97
ARHGEF28Q8N1W1 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC27.36■■□□□ 1.97
ARHGEF28Q8N1W1 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
ARHGEF28Q8N1W1 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC27.35■■□□□ 1.97
ARHGEF28Q8N1W1 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC27.35■■□□□ 1.97
ARHGEF28Q8N1W1 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC27.35■■□□□ 1.97
ARHGEF28Q8N1W1 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC27.35■■□□□ 1.97
ARHGEF28Q8N1W1 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC27.35■■□□□ 1.97
ARHGEF28Q8N1W1 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
ARHGEF28Q8N1W1 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC27.35■■□□□ 1.97
ARHGEF28Q8N1W1 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC27.35■■□□□ 1.97
ARHGEF28Q8N1W1 CRYGFP-201ENST00000418459 633 ntBASIC27.35■■□□□ 1.97
ARHGEF28Q8N1W1 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC27.35■■□□□ 1.97
ARHGEF28Q8N1W1 AP000692.2-201ENST00000608391 879 ntBASIC27.35■■□□□ 1.97
ARHGEF28Q8N1W1 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC27.35■■□□□ 1.97
ARHGEF28Q8N1W1 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC27.35■■□□□ 1.97
ARHGEF28Q8N1W1 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC27.35■■□□□ 1.97
ARHGEF28Q8N1W1 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC27.34■■□□□ 1.97
ARHGEF28Q8N1W1 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC27.34■■□□□ 1.97
ARHGEF28Q8N1W1 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC27.34■■□□□ 1.97
ARHGEF28Q8N1W1 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
ARHGEF28Q8N1W1 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC27.34■■□□□ 1.97
ARHGEF28Q8N1W1 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC27.34■■□□□ 1.97
ARHGEF28Q8N1W1 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC27.34■■□□□ 1.97
ARHGEF28Q8N1W1 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC27.34■■□□□ 1.97
ARHGEF28Q8N1W1 AC022616.7-201ENST00000525383 220 ntBASIC27.34■■□□□ 1.97
ARHGEF28Q8N1W1 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC27.34■■□□□ 1.97
ARHGEF28Q8N1W1 CLN6-221ENST00000637494 765 ntTSL 5 BASIC27.34■■□□□ 1.97
ARHGEF28Q8N1W1 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
ARHGEF28Q8N1W1 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC27.34■■□□□ 1.97
ARHGEF28Q8N1W1 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC27.34■■□□□ 1.97
ARHGEF28Q8N1W1 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC27.33■■□□□ 1.97
ARHGEF28Q8N1W1 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC27.33■■□□□ 1.97
ARHGEF28Q8N1W1 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC27.33■■□□□ 1.97
ARHGEF28Q8N1W1 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC27.33■■□□□ 1.97
ARHGEF28Q8N1W1 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC27.33■■□□□ 1.97
ARHGEF28Q8N1W1 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC27.33■■□□□ 1.97
ARHGEF28Q8N1W1 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
ARHGEF28Q8N1W1 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
ARHGEF28Q8N1W1 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
ARHGEF28Q8N1W1 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC27.33■■□□□ 1.97
ARHGEF28Q8N1W1 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC27.33■■□□□ 1.97
ARHGEF28Q8N1W1 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC27.33■■□□□ 1.96
ARHGEF28Q8N1W1 AC008040.2-201ENST00000461049 708 ntBASIC27.33■■□□□ 1.96
ARHGEF28Q8N1W1 RNF146-204ENST00000476956 884 ntTSL 2 BASIC27.33■■□□□ 1.96
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms