Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TMEFF1Q8IYR6 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TMEFF1Q8IYR6 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
TMEFF1Q8IYR6 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TMEFF1Q8IYR6 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TMEFF1Q8IYR6 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
TMEFF1Q8IYR6 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TMEFF1Q8IYR6 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC19.57■□□□□ 0.72
TMEFF1Q8IYR6 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC19.57■□□□□ 0.72
TMEFF1Q8IYR6 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC19.57■□□□□ 0.72
TMEFF1Q8IYR6 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC19.57■□□□□ 0.72
TMEFF1Q8IYR6 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
TMEFF1Q8IYR6 CYGB-204ENST00000589342 815 ntTSL 3 BASIC19.57■□□□□ 0.72
TMEFF1Q8IYR6 USF2-205ENST00000594064 1179 ntTSL 2 BASIC19.57■□□□□ 0.72
TMEFF1Q8IYR6 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TMEFF1Q8IYR6 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC19.56■□□□□ 0.72
TMEFF1Q8IYR6 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TMEFF1Q8IYR6 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TMEFF1Q8IYR6 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TMEFF1Q8IYR6 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC19.56■□□□□ 0.72
TMEFF1Q8IYR6 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TMEFF1Q8IYR6 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
TMEFF1Q8IYR6 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC19.56■□□□□ 0.72
TMEFF1Q8IYR6 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC19.56■□□□□ 0.72
TMEFF1Q8IYR6 AC022616.7-201ENST00000525383 220 ntBASIC19.56■□□□□ 0.72
TMEFF1Q8IYR6 EFS-203ENST00000429593 2610 ntTSL 2 BASIC19.56■□□□□ 0.72
TMEFF1Q8IYR6 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TMEFF1Q8IYR6 KRT16P6-202ENST00000425692 1426 ntBASIC19.56■□□□□ 0.72
TMEFF1Q8IYR6 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TMEFF1Q8IYR6 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TMEFF1Q8IYR6 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC19.56■□□□□ 0.72
TMEFF1Q8IYR6 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
TMEFF1Q8IYR6 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TMEFF1Q8IYR6 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TMEFF1Q8IYR6 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
TMEFF1Q8IYR6 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TMEFF1Q8IYR6 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
TMEFF1Q8IYR6 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
TMEFF1Q8IYR6 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC19.55■□□□□ 0.72
TMEFF1Q8IYR6 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TMEFF1Q8IYR6 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC19.55■□□□□ 0.72
TMEFF1Q8IYR6 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TMEFF1Q8IYR6 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
TMEFF1Q8IYR6 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
TMEFF1Q8IYR6 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TMEFF1Q8IYR6 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TMEFF1Q8IYR6 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TMEFF1Q8IYR6 HIST1H2APS4-201ENST00000362070 348 ntBASIC19.55■□□□□ 0.72
TMEFF1Q8IYR6 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TMEFF1Q8IYR6 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
TMEFF1Q8IYR6 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC19.55■□□□□ 0.72
TMEFF1Q8IYR6 UPK3BP1-201ENST00000428678 509 ntBASIC19.55■□□□□ 0.72
TMEFF1Q8IYR6 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TMEFF1Q8IYR6 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC19.55■□□□□ 0.72
TMEFF1Q8IYR6 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC19.55■□□□□ 0.72
TMEFF1Q8IYR6 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC19.55■□□□□ 0.72
TMEFF1Q8IYR6 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC19.55■□□□□ 0.72
TMEFF1Q8IYR6 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC19.55■□□□□ 0.72
TMEFF1Q8IYR6 AC130371.2-201ENST00000619443 611 ntBASIC19.55■□□□□ 0.72
TMEFF1Q8IYR6 AL358472.4-201ENST00000633140 710 ntBASIC19.55■□□□□ 0.72
TMEFF1Q8IYR6 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TMEFF1Q8IYR6 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC19.55■□□□□ 0.72
TMEFF1Q8IYR6 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TMEFF1Q8IYR6 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC19.55■□□□□ 0.72
TMEFF1Q8IYR6 GOLGA6L3-201ENST00000507199 1679 ntBASIC19.55■□□□□ 0.72
TMEFF1Q8IYR6 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TMEFF1Q8IYR6 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TMEFF1Q8IYR6 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TMEFF1Q8IYR6 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TMEFF1Q8IYR6 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
TMEFF1Q8IYR6 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC19.54■□□□□ 0.72
TMEFF1Q8IYR6 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC19.54■□□□□ 0.72
TMEFF1Q8IYR6 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TMEFF1Q8IYR6 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC19.54■□□□□ 0.72
TMEFF1Q8IYR6 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TMEFF1Q8IYR6 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TMEFF1Q8IYR6 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TMEFF1Q8IYR6 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC19.54■□□□□ 0.72
TMEFF1Q8IYR6 AC063952.2-201ENST00000498792 1227 ntBASIC19.54■□□□□ 0.72
TMEFF1Q8IYR6 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC19.54■□□□□ 0.72
TMEFF1Q8IYR6 LINC01238-205ENST00000567549 1107 ntBASIC19.54■□□□□ 0.72
TMEFF1Q8IYR6 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
TMEFF1Q8IYR6 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC19.54■□□□□ 0.72
TMEFF1Q8IYR6 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TMEFF1Q8IYR6 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
TMEFF1Q8IYR6 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC19.54■□□□□ 0.72
TMEFF1Q8IYR6 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TMEFF1Q8IYR6 MED25-212ENST00000618715 1467 ntTSL 5 BASIC19.54■□□□□ 0.72
TMEFF1Q8IYR6 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TMEFF1Q8IYR6 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
TMEFF1Q8IYR6 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TMEFF1Q8IYR6 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TMEFF1Q8IYR6 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TMEFF1Q8IYR6 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC19.53■□□□□ 0.72
TMEFF1Q8IYR6 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TMEFF1Q8IYR6 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC19.53■□□□□ 0.72
TMEFF1Q8IYR6 AC117947.1-201ENST00000427448 529 ntBASIC19.53■□□□□ 0.72
TMEFF1Q8IYR6 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TMEFF1Q8IYR6 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC19.53■□□□□ 0.72
TMEFF1Q8IYR6 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC19.53■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms