Protein–RNA interactions for Protein: Q7Z7F7

MRPL55, 39S ribosomal protein L55, mitochondrial, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55Q7Z7F7 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
MRPL55Q7Z7F7 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
MRPL55Q7Z7F7 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
MRPL55Q7Z7F7 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
MRPL55Q7Z7F7 HLA-G-202ENST00000376815 851 ntBASIC12.65□□□□□ -0.38
MRPL55Q7Z7F7 HLA-G-203ENST00000376818 1127 ntBASIC12.65□□□□□ -0.38
MRPL55Q7Z7F7 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC12.65□□□□□ -0.38
MRPL55Q7Z7F7 AC007322.1-201ENST00000426983 750 ntBASIC12.65□□□□□ -0.38
MRPL55Q7Z7F7 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
MRPL55Q7Z7F7 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC12.65□□□□□ -0.38
MRPL55Q7Z7F7 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
MRPL55Q7Z7F7 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
MRPL55Q7Z7F7 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC12.65□□□□□ -0.38
MRPL55Q7Z7F7 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
MRPL55Q7Z7F7 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
MRPL55Q7Z7F7 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
MRPL55Q7Z7F7 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC12.65□□□□□ -0.39
MRPL55Q7Z7F7 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC12.65□□□□□ -0.39
MRPL55Q7Z7F7 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
MRPL55Q7Z7F7 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
MRPL55Q7Z7F7 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
MRPL55Q7Z7F7 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
MRPL55Q7Z7F7 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC12.64□□□□□ -0.39
MRPL55Q7Z7F7 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
MRPL55Q7Z7F7 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC12.64□□□□□ -0.39
MRPL55Q7Z7F7 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
MRPL55Q7Z7F7 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
MRPL55Q7Z7F7 AC120498.9-201ENST00000339021 3867 ntBASIC12.64□□□□□ -0.39
MRPL55Q7Z7F7 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
MRPL55Q7Z7F7 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
MRPL55Q7Z7F7 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC12.64□□□□□ -0.39
MRPL55Q7Z7F7 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
MRPL55Q7Z7F7 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
MRPL55Q7Z7F7 METTL26-203ENST00000397664 604 ntTSL 2 BASIC12.64□□□□□ -0.39
MRPL55Q7Z7F7 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC12.64□□□□□ -0.39
MRPL55Q7Z7F7 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
MRPL55Q7Z7F7 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC12.64□□□□□ -0.39
MRPL55Q7Z7F7 AC026271.2-201ENST00000428091 497 ntBASIC12.64□□□□□ -0.39
MRPL55Q7Z7F7 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
MRPL55Q7Z7F7 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC12.64□□□□□ -0.39
MRPL55Q7Z7F7 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
MRPL55Q7Z7F7 CYP2T3P-201ENST00000601990 817 ntBASIC12.64□□□□□ -0.39
MRPL55Q7Z7F7 AL031963.3-201ENST00000606441 850 ntBASIC12.64□□□□□ -0.39
MRPL55Q7Z7F7 AL589743.5-201ENST00000616611 1050 ntBASIC12.64□□□□□ -0.39
MRPL55Q7Z7F7 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC12.64□□□□□ -0.39
MRPL55Q7Z7F7 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
MRPL55Q7Z7F7 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC12.64□□□□□ -0.39
MRPL55Q7Z7F7 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
MRPL55Q7Z7F7 GCK-205ENST00000437084 1385 ntTSL 5 BASIC12.64□□□□□ -0.39
MRPL55Q7Z7F7 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
MRPL55Q7Z7F7 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
MRPL55Q7Z7F7 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
MRPL55Q7Z7F7 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
MRPL55Q7Z7F7 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
MRPL55Q7Z7F7 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
MRPL55Q7Z7F7 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
MRPL55Q7Z7F7 AC007952.6-201ENST00000573168 2673 ntBASIC12.64□□□□□ -0.39
MRPL55Q7Z7F7 AC003957.1-201ENST00000625108 2673 ntBASIC12.64□□□□□ -0.39
MRPL55Q7Z7F7 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
MRPL55Q7Z7F7 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
MRPL55Q7Z7F7 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC12.64□□□□□ -0.39
MRPL55Q7Z7F7 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
MRPL55Q7Z7F7 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
MRPL55Q7Z7F7 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
MRPL55Q7Z7F7 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
MRPL55Q7Z7F7 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
MRPL55Q7Z7F7 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
MRPL55Q7Z7F7 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC12.63□□□□□ -0.39
MRPL55Q7Z7F7 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
MRPL55Q7Z7F7 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC12.63□□□□□ -0.39
MRPL55Q7Z7F7 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
MRPL55Q7Z7F7 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
MRPL55Q7Z7F7 HES2-205ENST00000487437 968 ntTSL 3 BASIC12.63□□□□□ -0.39
MRPL55Q7Z7F7 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
MRPL55Q7Z7F7 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
MRPL55Q7Z7F7 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
MRPL55Q7Z7F7 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC12.63□□□□□ -0.39
MRPL55Q7Z7F7 BRWD1-AS2-201ENST00000603064 1028 ntBASIC12.63□□□□□ -0.39
MRPL55Q7Z7F7 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC12.63□□□□□ -0.39
MRPL55Q7Z7F7 ANKRD20A6P-201ENST00000618763 204 ntBASIC12.63□□□□□ -0.39
MRPL55Q7Z7F7 OR10C1-204ENST00000622521 1039 ntBASIC12.63□□□□□ -0.39
MRPL55Q7Z7F7 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
MRPL55Q7Z7F7 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC12.63□□□□□ -0.39
MRPL55Q7Z7F7 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC12.63□□□□□ -0.39
MRPL55Q7Z7F7 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC12.63□□□□□ -0.39
MRPL55Q7Z7F7 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC12.63□□□□□ -0.39
MRPL55Q7Z7F7 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
MRPL55Q7Z7F7 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
MRPL55Q7Z7F7 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
MRPL55Q7Z7F7 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
MRPL55Q7Z7F7 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC12.63□□□□□ -0.39
MRPL55Q7Z7F7 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
MRPL55Q7Z7F7 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
MRPL55Q7Z7F7 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
MRPL55Q7Z7F7 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
MRPL55Q7Z7F7 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
MRPL55Q7Z7F7 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
MRPL55Q7Z7F7 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
MRPL55Q7Z7F7 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
MRPL55Q7Z7F7 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms