Protein–RNA interactions for Protein: Q7Z6J0

SH3RF1, E3 ubiquitin-protein ligase SH3RF1, humanhuman

Predictions only

Length 888 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1Q7Z6J0 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC22.6■■□□□ 1.21
SH3RF1Q7Z6J0 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC22.6■■□□□ 1.21
SH3RF1Q7Z6J0 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
SH3RF1Q7Z6J0 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC22.59■■□□□ 1.21
SH3RF1Q7Z6J0 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC22.59■■□□□ 1.21
SH3RF1Q7Z6J0 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
SH3RF1Q7Z6J0 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC22.59■■□□□ 1.21
SH3RF1Q7Z6J0 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC22.59■■□□□ 1.21
SH3RF1Q7Z6J0 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
SH3RF1Q7Z6J0 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
SH3RF1Q7Z6J0 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
SH3RF1Q7Z6J0 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC22.59■■□□□ 1.21
SH3RF1Q7Z6J0 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC22.59■■□□□ 1.21
SH3RF1Q7Z6J0 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC22.59■■□□□ 1.21
SH3RF1Q7Z6J0 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC22.59■■□□□ 1.21
SH3RF1Q7Z6J0 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
SH3RF1Q7Z6J0 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
SH3RF1Q7Z6J0 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC22.59■■□□□ 1.21
SH3RF1Q7Z6J0 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC22.59■■□□□ 1.21
SH3RF1Q7Z6J0 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
SH3RF1Q7Z6J0 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC22.59■■□□□ 1.21
SH3RF1Q7Z6J0 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC22.59■■□□□ 1.21
SH3RF1Q7Z6J0 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
SH3RF1Q7Z6J0 AL691432.2-201ENST00000607222 2038 ntBASIC22.58■■□□□ 1.21
SH3RF1Q7Z6J0 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC22.58■■□□□ 1.21
SH3RF1Q7Z6J0 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC22.58■■□□□ 1.21
SH3RF1Q7Z6J0 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC22.58■■□□□ 1.21
SH3RF1Q7Z6J0 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC22.58■■□□□ 1.21
SH3RF1Q7Z6J0 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
SH3RF1Q7Z6J0 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
SH3RF1Q7Z6J0 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC22.58■■□□□ 1.21
SH3RF1Q7Z6J0 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC22.58■■□□□ 1.21
SH3RF1Q7Z6J0 PGM5P4-201ENST00000421970 445 ntBASIC22.58■■□□□ 1.21
SH3RF1Q7Z6J0 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC22.58■■□□□ 1.21
SH3RF1Q7Z6J0 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC22.58■■□□□ 1.21
SH3RF1Q7Z6J0 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC22.58■■□□□ 1.21
SH3RF1Q7Z6J0 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC22.58■■□□□ 1.21
SH3RF1Q7Z6J0 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC22.58■■□□□ 1.2
SH3RF1Q7Z6J0 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC22.58■■□□□ 1.2
SH3RF1Q7Z6J0 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
SH3RF1Q7Z6J0 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC22.57■■□□□ 1.2
SH3RF1Q7Z6J0 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
SH3RF1Q7Z6J0 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC22.57■■□□□ 1.2
SH3RF1Q7Z6J0 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
SH3RF1Q7Z6J0 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
SH3RF1Q7Z6J0 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
SH3RF1Q7Z6J0 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC22.57■■□□□ 1.2
SH3RF1Q7Z6J0 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC22.57■■□□□ 1.2
SH3RF1Q7Z6J0 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC22.57■■□□□ 1.2
SH3RF1Q7Z6J0 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC22.57■■□□□ 1.2
SH3RF1Q7Z6J0 AL590326.2-201ENST00000625139 305 ntBASIC22.57■■□□□ 1.2
SH3RF1Q7Z6J0 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
SH3RF1Q7Z6J0 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
SH3RF1Q7Z6J0 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC22.57■■□□□ 1.2
SH3RF1Q7Z6J0 LBX2-AS1-202ENST00000603175 2083 ntBASIC22.57■■□□□ 1.2
SH3RF1Q7Z6J0 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
SH3RF1Q7Z6J0 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC22.57■■□□□ 1.2
SH3RF1Q7Z6J0 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
SH3RF1Q7Z6J0 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
SH3RF1Q7Z6J0 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
SH3RF1Q7Z6J0 STK25-205ENST00000405883 1904 ntTSL 2 BASIC22.57■■□□□ 1.2
SH3RF1Q7Z6J0 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
SH3RF1Q7Z6J0 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
SH3RF1Q7Z6J0 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
SH3RF1Q7Z6J0 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
SH3RF1Q7Z6J0 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
SH3RF1Q7Z6J0 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
SH3RF1Q7Z6J0 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
SH3RF1Q7Z6J0 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC22.56■■□□□ 1.2
SH3RF1Q7Z6J0 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC22.56■■□□□ 1.2
SH3RF1Q7Z6J0 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
SH3RF1Q7Z6J0 AC092865.7-201ENST00000641832 219 ntBASIC22.56■■□□□ 1.2
SH3RF1Q7Z6J0 PTBP1P-201ENST00000554374 1601 ntBASIC22.56■■□□□ 1.2
SH3RF1Q7Z6J0 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
SH3RF1Q7Z6J0 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC22.56■■□□□ 1.2
SH3RF1Q7Z6J0 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
SH3RF1Q7Z6J0 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
SH3RF1Q7Z6J0 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
SH3RF1Q7Z6J0 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC22.55■■□□□ 1.2
SH3RF1Q7Z6J0 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC22.55■■□□□ 1.2
SH3RF1Q7Z6J0 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
SH3RF1Q7Z6J0 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
SH3RF1Q7Z6J0 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
SH3RF1Q7Z6J0 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC22.55■■□□□ 1.2
SH3RF1Q7Z6J0 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
SH3RF1Q7Z6J0 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC22.55■■□□□ 1.2
SH3RF1Q7Z6J0 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC22.55■■□□□ 1.2
SH3RF1Q7Z6J0 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
SH3RF1Q7Z6J0 MIR6786-201ENST00000616843 113 ntBASIC22.55■■□□□ 1.2
SH3RF1Q7Z6J0 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC22.55■■□□□ 1.2
SH3RF1Q7Z6J0 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
SH3RF1Q7Z6J0 MOK-233ENST00000524214 1539 ntTSL 2 BASIC22.55■■□□□ 1.2
SH3RF1Q7Z6J0 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
SH3RF1Q7Z6J0 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
SH3RF1Q7Z6J0 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
SH3RF1Q7Z6J0 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC22.55■■□□□ 1.2
SH3RF1Q7Z6J0 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
SH3RF1Q7Z6J0 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC22.54■■□□□ 1.2
SH3RF1Q7Z6J0 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC22.54■■□□□ 1.2
SH3RF1Q7Z6J0 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms