Protein–RNA interactions for Protein: Q7L0R7

RNF44, RING finger protein 44, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF44Q7L0R7 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RNF44Q7L0R7 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RNF44Q7L0R7 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
RNF44Q7L0R7 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
RNF44Q7L0R7 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
RNF44Q7L0R7 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RNF44Q7L0R7 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
RNF44Q7L0R7 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC18.87■□□□□ 0.61
RNF44Q7L0R7 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC18.87■□□□□ 0.61
RNF44Q7L0R7 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RNF44Q7L0R7 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC18.87■□□□□ 0.61
RNF44Q7L0R7 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
RNF44Q7L0R7 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC18.87■□□□□ 0.61
RNF44Q7L0R7 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC18.87■□□□□ 0.61
RNF44Q7L0R7 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RNF44Q7L0R7 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC18.87■□□□□ 0.61
RNF44Q7L0R7 RHOD-202ENST00000532559 538 ntTSL 3 BASIC18.87■□□□□ 0.61
RNF44Q7L0R7 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC18.87■□□□□ 0.61
RNF44Q7L0R7 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC18.87■□□□□ 0.61
RNF44Q7L0R7 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
RNF44Q7L0R7 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RNF44Q7L0R7 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC18.86■□□□□ 0.61
RNF44Q7L0R7 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
RNF44Q7L0R7 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RNF44Q7L0R7 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC18.86■□□□□ 0.61
RNF44Q7L0R7 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RNF44Q7L0R7 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
RNF44Q7L0R7 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RNF44Q7L0R7 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC18.86■□□□□ 0.61
RNF44Q7L0R7 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC18.86■□□□□ 0.61
RNF44Q7L0R7 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RNF44Q7L0R7 BAALC-201ENST00000297574 801 ntTSL 3 BASIC18.86■□□□□ 0.61
RNF44Q7L0R7 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
RNF44Q7L0R7 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC18.86■□□□□ 0.61
RNF44Q7L0R7 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
RNF44Q7L0R7 F2R-202ENST00000505600 442 ntTSL 2 BASIC18.86■□□□□ 0.61
RNF44Q7L0R7 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC18.86■□□□□ 0.61
RNF44Q7L0R7 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC18.86■□□□□ 0.61
RNF44Q7L0R7 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
RNF44Q7L0R7 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RNF44Q7L0R7 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RNF44Q7L0R7 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RNF44Q7L0R7 TCF3P1-201ENST00000423021 1937 ntBASIC18.86■□□□□ 0.61
RNF44Q7L0R7 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC18.86■□□□□ 0.61
RNF44Q7L0R7 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RNF44Q7L0R7 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RNF44Q7L0R7 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RNF44Q7L0R7 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC18.85■□□□□ 0.61
RNF44Q7L0R7 AP006587.1-201ENST00000534129 1502 ntBASIC18.85■□□□□ 0.61
RNF44Q7L0R7 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
RNF44Q7L0R7 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RNF44Q7L0R7 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC18.85■□□□□ 0.61
RNF44Q7L0R7 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
RNF44Q7L0R7 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RNF44Q7L0R7 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RNF44Q7L0R7 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC18.85■□□□□ 0.61
RNF44Q7L0R7 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RNF44Q7L0R7 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RNF44Q7L0R7 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RNF44Q7L0R7 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC18.85■□□□□ 0.61
RNF44Q7L0R7 SPIB-206ENST00000596074 847 ntTSL 2 BASIC18.85■□□□□ 0.61
RNF44Q7L0R7 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC18.85■□□□□ 0.61
RNF44Q7L0R7 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC18.85■□□□□ 0.61
RNF44Q7L0R7 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC18.85■□□□□ 0.61
RNF44Q7L0R7 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RNF44Q7L0R7 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RNF44Q7L0R7 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
RNF44Q7L0R7 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
RNF44Q7L0R7 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC18.84■□□□□ 0.61
RNF44Q7L0R7 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
RNF44Q7L0R7 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC18.84■□□□□ 0.61
RNF44Q7L0R7 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RNF44Q7L0R7 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RNF44Q7L0R7 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RNF44Q7L0R7 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
RNF44Q7L0R7 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RNF44Q7L0R7 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
RNF44Q7L0R7 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RNF44Q7L0R7 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC18.84■□□□□ 0.61
RNF44Q7L0R7 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RNF44Q7L0R7 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RNF44Q7L0R7 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RNF44Q7L0R7 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
RNF44Q7L0R7 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC18.84■□□□□ 0.61
RNF44Q7L0R7 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC18.84■□□□□ 0.61
RNF44Q7L0R7 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC18.84■□□□□ 0.61
RNF44Q7L0R7 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC18.84■□□□□ 0.61
RNF44Q7L0R7 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC18.84■□□□□ 0.61
RNF44Q7L0R7 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC18.84■□□□□ 0.61
RNF44Q7L0R7 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC18.84■□□□□ 0.61
RNF44Q7L0R7 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
RNF44Q7L0R7 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RNF44Q7L0R7 AC009237.14-201ENST00000609975 1594 ntBASIC18.84■□□□□ 0.61
RNF44Q7L0R7 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RNF44Q7L0R7 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC18.84■□□□□ 0.61
RNF44Q7L0R7 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RNF44Q7L0R7 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RNF44Q7L0R7 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RNF44Q7L0R7 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
RNF44Q7L0R7 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms