Protein–RNA interactions for Protein: Q6YHK3

CD109, CD109 antigen, humanhuman

Predictions only

Length 1,445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD109Q6YHK3 FAAHP1-202ENST00000446499 1238 ntBASIC30.1■■■□□ 2.41
CD109Q6YHK3 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC30.1■■■□□ 2.41
CD109Q6YHK3 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC30.1■■■□□ 2.41
CD109Q6YHK3 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC30.1■■■□□ 2.41
CD109Q6YHK3 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
CD109Q6YHK3 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC30.09■■■□□ 2.41
CD109Q6YHK3 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
CD109Q6YHK3 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
CD109Q6YHK3 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC30.09■■■□□ 2.41
CD109Q6YHK3 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC30.09■■■□□ 2.41
CD109Q6YHK3 UNC93B7-201ENST00000509439 705 ntBASIC30.09■■■□□ 2.41
CD109Q6YHK3 GLRB-205ENST00000512619 728 ntTSL 3 BASIC30.09■■■□□ 2.41
CD109Q6YHK3 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC30.09■■■□□ 2.41
CD109Q6YHK3 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC30.09■■■□□ 2.41
CD109Q6YHK3 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC30.09■■■□□ 2.41
CD109Q6YHK3 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
CD109Q6YHK3 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC30.08■■■□□ 2.41
CD109Q6YHK3 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC30.08■■■□□ 2.41
CD109Q6YHK3 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
CD109Q6YHK3 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC30.08■■■□□ 2.41
CD109Q6YHK3 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
CD109Q6YHK3 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
CD109Q6YHK3 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
CD109Q6YHK3 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC30.08■■■□□ 2.41
CD109Q6YHK3 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
CD109Q6YHK3 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
CD109Q6YHK3 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC30.08■■■□□ 2.41
CD109Q6YHK3 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC30.08■■■□□ 2.41
CD109Q6YHK3 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
CD109Q6YHK3 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
CD109Q6YHK3 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
CD109Q6YHK3 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC30.07■■■□□ 2.4
CD109Q6YHK3 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC30.07■■■□□ 2.4
CD109Q6YHK3 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
CD109Q6YHK3 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC30.07■■■□□ 2.4
CD109Q6YHK3 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC30.07■■■□□ 2.4
CD109Q6YHK3 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
CD109Q6YHK3 AL121603.2-201ENST00000557373 2117 ntBASIC30.07■■■□□ 2.4
CD109Q6YHK3 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
CD109Q6YHK3 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC30.06■■■□□ 2.4
CD109Q6YHK3 NEK4P2-201ENST00000580004 1012 ntBASIC30.06■■■□□ 2.4
CD109Q6YHK3 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC30.06■■■□□ 2.4
CD109Q6YHK3 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC30.06■■■□□ 2.4
CD109Q6YHK3 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
CD109Q6YHK3 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC30.06■■■□□ 2.4
CD109Q6YHK3 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
CD109Q6YHK3 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
CD109Q6YHK3 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC30.06■■■□□ 2.4
CD109Q6YHK3 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC30.06■■■□□ 2.4
CD109Q6YHK3 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC30.06■■■□□ 2.4
CD109Q6YHK3 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC30.06■■■□□ 2.4
CD109Q6YHK3 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC30.06■■■□□ 2.4
CD109Q6YHK3 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
CD109Q6YHK3 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
CD109Q6YHK3 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
CD109Q6YHK3 AP000593.1-201ENST00000393668 712 ntBASIC30.05■■■□□ 2.4
CD109Q6YHK3 GCSHP2-201ENST00000560971 527 ntBASIC30.05■■■□□ 2.4
CD109Q6YHK3 CKBP1-201ENST00000565489 1086 ntBASIC30.05■■■□□ 2.4
CD109Q6YHK3 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC30.05■■■□□ 2.4
CD109Q6YHK3 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC30.05■■■□□ 2.4
CD109Q6YHK3 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC30.05■■■□□ 2.4
CD109Q6YHK3 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC30.05■■■□□ 2.4
CD109Q6YHK3 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC30.05■■■□□ 2.4
CD109Q6YHK3 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC30.05■■■□□ 2.4
CD109Q6YHK3 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
CD109Q6YHK3 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC30.05■■■□□ 2.4
CD109Q6YHK3 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC30.05■■■□□ 2.4
CD109Q6YHK3 CALM1-205ENST00000553542 877 ntTSL 5 BASIC30.05■■■□□ 2.4
CD109Q6YHK3 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC30.05■■■□□ 2.4
CD109Q6YHK3 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC30.05■■■□□ 2.4
CD109Q6YHK3 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC30.05■■■□□ 2.4
CD109Q6YHK3 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC30.04■■■□□ 2.4
CD109Q6YHK3 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
CD109Q6YHK3 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC30.04■■■□□ 2.4
CD109Q6YHK3 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC30.04■■■□□ 2.4
CD109Q6YHK3 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC30.04■■■□□ 2.4
CD109Q6YHK3 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC30.04■■■□□ 2.4
CD109Q6YHK3 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
CD109Q6YHK3 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
CD109Q6YHK3 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC30.03■■■□□ 2.4
CD109Q6YHK3 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC30.03■■■□□ 2.4
CD109Q6YHK3 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
CD109Q6YHK3 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
CD109Q6YHK3 AC092329.2-201ENST00000598402 547 ntBASIC30.03■■■□□ 2.4
CD109Q6YHK3 FGF14-AS2-201ENST00000606448 1074 ntBASIC30.03■■■□□ 2.4
CD109Q6YHK3 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
CD109Q6YHK3 AC121338.2-201ENST00000622535 1744 ntBASIC30.02■■■□□ 2.4
CD109Q6YHK3 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
CD109Q6YHK3 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
CD109Q6YHK3 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC30.02■■■□□ 2.4
CD109Q6YHK3 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC30.02■■■□□ 2.4
CD109Q6YHK3 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC30.02■■■□□ 2.4
CD109Q6YHK3 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC30.02■■■□□ 2.4
CD109Q6YHK3 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC30.02■■■□□ 2.4
CD109Q6YHK3 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
CD109Q6YHK3 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC30.02■■■□□ 2.4
CD109Q6YHK3 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC30.01■■■□□ 2.4
CD109Q6YHK3 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.4
CD109Q6YHK3 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC30.01■■■□□ 2.39
CD109Q6YHK3 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC30.01■■■□□ 2.39
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms