Protein–RNA interactions for Protein: Q6W349

LINC00575, Putative uncharacterized protein encoded by LINC00575, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00575Q6W349 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
LINC00575Q6W349 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
LINC00575Q6W349 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
LINC00575Q6W349 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
LINC00575Q6W349 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
LINC00575Q6W349 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC12.47□□□□□ -0.41
LINC00575Q6W349 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
LINC00575Q6W349 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
LINC00575Q6W349 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
LINC00575Q6W349 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
LINC00575Q6W349 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
LINC00575Q6W349 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
LINC00575Q6W349 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
LINC00575Q6W349 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
LINC00575Q6W349 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
LINC00575Q6W349 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC12.46□□□□□ -0.41
LINC00575Q6W349 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
LINC00575Q6W349 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
LINC00575Q6W349 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.41
LINC00575Q6W349 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
LINC00575Q6W349 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC12.46□□□□□ -0.41
LINC00575Q6W349 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
LINC00575Q6W349 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
LINC00575Q6W349 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
LINC00575Q6W349 LHPP-203ENST00000392757 840 ntTSL 3 BASIC12.46□□□□□ -0.41
LINC00575Q6W349 MFF-208ENST00000409616 1247 ntTSL 5 BASIC12.46□□□□□ -0.41
LINC00575Q6W349 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC12.46□□□□□ -0.41
LINC00575Q6W349 AC009299.2-201ENST00000482477 511 ntBASIC12.46□□□□□ -0.41
LINC00575Q6W349 IGHV3-19-201ENST00000521488 291 ntBASIC12.46□□□□□ -0.41
LINC00575Q6W349 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
LINC00575Q6W349 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
LINC00575Q6W349 AC120498.10-201ENST00000621827 505 ntBASIC12.46□□□□□ -0.41
LINC00575Q6W349 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
LINC00575Q6W349 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC12.46□□□□□ -0.41
LINC00575Q6W349 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
LINC00575Q6W349 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
LINC00575Q6W349 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
LINC00575Q6W349 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC12.46□□□□□ -0.42
LINC00575Q6W349 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
LINC00575Q6W349 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
LINC00575Q6W349 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
LINC00575Q6W349 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
LINC00575Q6W349 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
LINC00575Q6W349 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC12.46□□□□□ -0.42
LINC00575Q6W349 PCDHB18P-201ENST00000524813 2368 ntBASIC12.45□□□□□ -0.42
LINC00575Q6W349 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC12.45□□□□□ -0.42
LINC00575Q6W349 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
LINC00575Q6W349 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
LINC00575Q6W349 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
LINC00575Q6W349 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
LINC00575Q6W349 WAC-202ENST00000347934 2839 ntTSL 5 BASIC12.45□□□□□ -0.42
LINC00575Q6W349 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
LINC00575Q6W349 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
LINC00575Q6W349 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
LINC00575Q6W349 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC12.45□□□□□ -0.42
LINC00575Q6W349 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
LINC00575Q6W349 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
LINC00575Q6W349 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
LINC00575Q6W349 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
LINC00575Q6W349 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC12.45□□□□□ -0.42
LINC00575Q6W349 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
LINC00575Q6W349 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC12.45□□□□□ -0.42
LINC00575Q6W349 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
LINC00575Q6W349 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC12.45□□□□□ -0.42
LINC00575Q6W349 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
LINC00575Q6W349 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
LINC00575Q6W349 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC12.45□□□□□ -0.42
LINC00575Q6W349 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC12.45□□□□□ -0.42
LINC00575Q6W349 AC126544.1-201ENST00000580842 1059 ntBASIC12.45□□□□□ -0.42
LINC00575Q6W349 FAM21FP-204ENST00000608637 956 ntBASIC12.45□□□□□ -0.42
LINC00575Q6W349 AC090164.3-201ENST00000610780 2143 ntBASIC12.45□□□□□ -0.42
LINC00575Q6W349 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
LINC00575Q6W349 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
LINC00575Q6W349 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
LINC00575Q6W349 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC12.45□□□□□ -0.42
LINC00575Q6W349 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
LINC00575Q6W349 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC12.45□□□□□ -0.42
LINC00575Q6W349 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC12.45□□□□□ -0.42
LINC00575Q6W349 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
LINC00575Q6W349 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
LINC00575Q6W349 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
LINC00575Q6W349 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
LINC00575Q6W349 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC12.45□□□□□ -0.42
LINC00575Q6W349 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
LINC00575Q6W349 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
LINC00575Q6W349 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
LINC00575Q6W349 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC12.45□□□□□ -0.42
LINC00575Q6W349 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
LINC00575Q6W349 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
LINC00575Q6W349 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC12.44□□□□□ -0.42
LINC00575Q6W349 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
LINC00575Q6W349 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
LINC00575Q6W349 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC12.44□□□□□ -0.42
LINC00575Q6W349 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC12.44□□□□□ -0.42
LINC00575Q6W349 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC12.44□□□□□ -0.42
LINC00575Q6W349 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
LINC00575Q6W349 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC12.44□□□□□ -0.42
LINC00575Q6W349 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
LINC00575Q6W349 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC12.44□□□□□ -0.42
LINC00575Q6W349 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms