Protein–RNA interactions for Protein: Q6NVH7

SWSAP1, ATPase SWSAP1, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SWSAP1Q6NVH7 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC21.95■■□□□ 1.1
SWSAP1Q6NVH7 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
SWSAP1Q6NVH7 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC21.95■■□□□ 1.1
SWSAP1Q6NVH7 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC21.95■■□□□ 1.1
SWSAP1Q6NVH7 KSR1P1-201ENST00000446298 240 ntBASIC21.95■■□□□ 1.1
SWSAP1Q6NVH7 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC21.95■■□□□ 1.1
SWSAP1Q6NVH7 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC21.95■■□□□ 1.1
SWSAP1Q6NVH7 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SWSAP1Q6NVH7 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
SWSAP1Q6NVH7 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
SWSAP1Q6NVH7 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
SWSAP1Q6NVH7 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC21.95■■□□□ 1.1
SWSAP1Q6NVH7 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
SWSAP1Q6NVH7 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC21.95■■□□□ 1.1
SWSAP1Q6NVH7 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SWSAP1Q6NVH7 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
SWSAP1Q6NVH7 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SWSAP1Q6NVH7 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
SWSAP1Q6NVH7 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SWSAP1Q6NVH7 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
SWSAP1Q6NVH7 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC21.94■■□□□ 1.1
SWSAP1Q6NVH7 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
SWSAP1Q6NVH7 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SWSAP1Q6NVH7 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC21.94■■□□□ 1.1
SWSAP1Q6NVH7 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
SWSAP1Q6NVH7 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SWSAP1Q6NVH7 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SWSAP1Q6NVH7 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SWSAP1Q6NVH7 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC21.94■■□□□ 1.1
SWSAP1Q6NVH7 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SWSAP1Q6NVH7 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC21.94■■□□□ 1.1
SWSAP1Q6NVH7 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC21.94■■□□□ 1.1
SWSAP1Q6NVH7 REXO1L12P-201ENST00000622156 912 ntBASIC21.94■■□□□ 1.1
SWSAP1Q6NVH7 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
SWSAP1Q6NVH7 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SWSAP1Q6NVH7 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC21.94■■□□□ 1.1
SWSAP1Q6NVH7 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
SWSAP1Q6NVH7 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SWSAP1Q6NVH7 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SWSAP1Q6NVH7 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
SWSAP1Q6NVH7 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
SWSAP1Q6NVH7 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
SWSAP1Q6NVH7 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
SWSAP1Q6NVH7 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SWSAP1Q6NVH7 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
SWSAP1Q6NVH7 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
SWSAP1Q6NVH7 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
SWSAP1Q6NVH7 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
SWSAP1Q6NVH7 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SWSAP1Q6NVH7 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
SWSAP1Q6NVH7 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
SWSAP1Q6NVH7 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC21.93■■□□□ 1.1
SWSAP1Q6NVH7 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC21.93■■□□□ 1.1
SWSAP1Q6NVH7 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC21.93■■□□□ 1.1
SWSAP1Q6NVH7 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC21.93■■□□□ 1.1
SWSAP1Q6NVH7 BX088651.1-201ENST00000540551 451 ntBASIC21.93■■□□□ 1.1
SWSAP1Q6NVH7 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SWSAP1Q6NVH7 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC21.93■■□□□ 1.1
SWSAP1Q6NVH7 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC21.93■■□□□ 1.1
SWSAP1Q6NVH7 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC21.93■■□□□ 1.1
SWSAP1Q6NVH7 SNX21-213ENST00000614929 587 ntTSL 5 BASIC21.93■■□□□ 1.1
SWSAP1Q6NVH7 AC073912.3-201ENST00000624414 853 ntBASIC21.93■■□□□ 1.1
SWSAP1Q6NVH7 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SWSAP1Q6NVH7 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
SWSAP1Q6NVH7 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SWSAP1Q6NVH7 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC21.92■■□□□ 1.1
SWSAP1Q6NVH7 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
SWSAP1Q6NVH7 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SWSAP1Q6NVH7 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC21.92■■□□□ 1.1
SWSAP1Q6NVH7 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SWSAP1Q6NVH7 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC21.92■■□□□ 1.1
SWSAP1Q6NVH7 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
SWSAP1Q6NVH7 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
SWSAP1Q6NVH7 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SWSAP1Q6NVH7 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SWSAP1Q6NVH7 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
SWSAP1Q6NVH7 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC21.92■■□□□ 1.1
SWSAP1Q6NVH7 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
SWSAP1Q6NVH7 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC21.92■■□□□ 1.1
SWSAP1Q6NVH7 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
SWSAP1Q6NVH7 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC21.92■■□□□ 1.1
SWSAP1Q6NVH7 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC21.92■■□□□ 1.1
SWSAP1Q6NVH7 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC21.92■■□□□ 1.1
SWSAP1Q6NVH7 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
SWSAP1Q6NVH7 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SWSAP1Q6NVH7 USP39-204ENST00000409766 2033 ntTSL 2 BASIC21.92■■□□□ 1.1
SWSAP1Q6NVH7 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC21.92■■□□□ 1.1
SWSAP1Q6NVH7 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
SWSAP1Q6NVH7 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SWSAP1Q6NVH7 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
SWSAP1Q6NVH7 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SWSAP1Q6NVH7 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
SWSAP1Q6NVH7 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
SWSAP1Q6NVH7 KRT16P1-201ENST00000399124 1418 ntBASIC21.91■■□□□ 1.1
SWSAP1Q6NVH7 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
SWSAP1Q6NVH7 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC21.91■■□□□ 1.1
SWSAP1Q6NVH7 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SWSAP1Q6NVH7 NUDT16P1-203ENST00000513809 620 ntBASIC21.91■■□□□ 1.1
SWSAP1Q6NVH7 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC21.91■■□□□ 1.1
SWSAP1Q6NVH7 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC21.91■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms