Protein–RNA interactions for Protein: Q5SRH9

TTC39A, Tetratricopeptide repeat protein 39A, humanhuman

Predictions only

Length 613 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39AQ5SRH9 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
TTC39AQ5SRH9 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
TTC39AQ5SRH9 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC23.98■■□□□ 1.43
TTC39AQ5SRH9 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC23.98■■□□□ 1.43
TTC39AQ5SRH9 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC23.98■■□□□ 1.43
TTC39AQ5SRH9 AC112907.3-201ENST00000577781 2400 ntBASIC23.98■■□□□ 1.43
TTC39AQ5SRH9 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
TTC39AQ5SRH9 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
TTC39AQ5SRH9 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
TTC39AQ5SRH9 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC23.98■■□□□ 1.43
TTC39AQ5SRH9 KRT18P16-201ENST00000510337 1294 ntBASIC23.98■■□□□ 1.43
TTC39AQ5SRH9 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC23.98■■□□□ 1.43
TTC39AQ5SRH9 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC23.98■■□□□ 1.43
TTC39AQ5SRH9 AF186192.3-201ENST00000583427 947 ntBASIC23.98■■□□□ 1.43
TTC39AQ5SRH9 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC23.98■■□□□ 1.43
TTC39AQ5SRH9 AP001412.1-201ENST00000608405 714 ntBASIC23.98■■□□□ 1.43
TTC39AQ5SRH9 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC23.98■■□□□ 1.43
TTC39AQ5SRH9 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC23.98■■□□□ 1.43
TTC39AQ5SRH9 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC23.98■■□□□ 1.43
TTC39AQ5SRH9 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC23.98■■□□□ 1.43
TTC39AQ5SRH9 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
TTC39AQ5SRH9 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
TTC39AQ5SRH9 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC23.98■■□□□ 1.43
TTC39AQ5SRH9 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC23.98■■□□□ 1.43
TTC39AQ5SRH9 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC23.98■■□□□ 1.43
TTC39AQ5SRH9 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC23.98■■□□□ 1.43
TTC39AQ5SRH9 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC23.98■■□□□ 1.43
TTC39AQ5SRH9 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
TTC39AQ5SRH9 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC23.98■■□□□ 1.43
TTC39AQ5SRH9 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC23.98■■□□□ 1.43
TTC39AQ5SRH9 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
TTC39AQ5SRH9 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC23.97■■□□□ 1.43
TTC39AQ5SRH9 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC23.97■■□□□ 1.43
TTC39AQ5SRH9 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC23.97■■□□□ 1.43
TTC39AQ5SRH9 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
TTC39AQ5SRH9 TCF3P1-201ENST00000423021 1937 ntBASIC23.97■■□□□ 1.43
TTC39AQ5SRH9 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC23.97■■□□□ 1.43
TTC39AQ5SRH9 TUBB8P6-201ENST00000436895 1288 ntBASIC23.97■■□□□ 1.43
TTC39AQ5SRH9 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC23.97■■□□□ 1.43
TTC39AQ5SRH9 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
TTC39AQ5SRH9 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
TTC39AQ5SRH9 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC23.97■■□□□ 1.43
TTC39AQ5SRH9 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
TTC39AQ5SRH9 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC23.97■■□□□ 1.43
TTC39AQ5SRH9 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC23.97■■□□□ 1.43
TTC39AQ5SRH9 AC113410.3-201ENST00000623366 203 ntBASIC23.97■■□□□ 1.43
TTC39AQ5SRH9 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
TTC39AQ5SRH9 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
TTC39AQ5SRH9 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC23.96■■□□□ 1.43
TTC39AQ5SRH9 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC23.96■■□□□ 1.43
TTC39AQ5SRH9 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC23.96■■□□□ 1.43
TTC39AQ5SRH9 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC23.96■■□□□ 1.43
TTC39AQ5SRH9 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
TTC39AQ5SRH9 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
TTC39AQ5SRH9 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC23.96■■□□□ 1.43
TTC39AQ5SRH9 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC23.96■■□□□ 1.43
TTC39AQ5SRH9 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC23.96■■□□□ 1.43
TTC39AQ5SRH9 AL353807.1-201ENST00000427475 662 ntBASIC23.96■■□□□ 1.43
TTC39AQ5SRH9 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
TTC39AQ5SRH9 MIR4497-201ENST00000583208 89 ntBASIC23.96■■□□□ 1.43
TTC39AQ5SRH9 RPS15-203ENST00000586096 570 ntTSL 2 BASIC23.96■■□□□ 1.43
TTC39AQ5SRH9 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC23.96■■□□□ 1.43
TTC39AQ5SRH9 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
TTC39AQ5SRH9 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC23.96■■□□□ 1.43
TTC39AQ5SRH9 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC23.96■■□□□ 1.43
TTC39AQ5SRH9 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
TTC39AQ5SRH9 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
TTC39AQ5SRH9 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC23.96■■□□□ 1.43
TTC39AQ5SRH9 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC23.95■■□□□ 1.43
TTC39AQ5SRH9 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC23.95■■□□□ 1.43
TTC39AQ5SRH9 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC23.95■■□□□ 1.43
TTC39AQ5SRH9 TMEM179-206ENST00000616017 1645 ntBASIC23.95■■□□□ 1.43
TTC39AQ5SRH9 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC23.95■■□□□ 1.43
TTC39AQ5SRH9 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC23.95■■□□□ 1.42
TTC39AQ5SRH9 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
TTC39AQ5SRH9 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
TTC39AQ5SRH9 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
TTC39AQ5SRH9 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
TTC39AQ5SRH9 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC23.95■■□□□ 1.42
TTC39AQ5SRH9 TSPY7P-201ENST00000431358 1114 ntBASIC23.95■■□□□ 1.42
TTC39AQ5SRH9 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC23.95■■□□□ 1.42
TTC39AQ5SRH9 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC23.95■■□□□ 1.42
TTC39AQ5SRH9 AP002982.1-201ENST00000492365 877 ntBASIC23.95■■□□□ 1.42
TTC39AQ5SRH9 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC23.95■■□□□ 1.42
TTC39AQ5SRH9 FDX2-207ENST00000494368 584 ntTSL 4 BASIC23.95■■□□□ 1.42
TTC39AQ5SRH9 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC23.95■■□□□ 1.42
TTC39AQ5SRH9 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC23.95■■□□□ 1.42
TTC39AQ5SRH9 AC009237.14-201ENST00000609975 1594 ntBASIC23.95■■□□□ 1.42
TTC39AQ5SRH9 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
TTC39AQ5SRH9 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
TTC39AQ5SRH9 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC23.94■■□□□ 1.42
TTC39AQ5SRH9 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
TTC39AQ5SRH9 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
TTC39AQ5SRH9 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC23.94■■□□□ 1.42
TTC39AQ5SRH9 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
TTC39AQ5SRH9 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC23.94■■□□□ 1.42
TTC39AQ5SRH9 SAPCD2P4-201ENST00000424595 1171 ntBASIC23.94■■□□□ 1.42
TTC39AQ5SRH9 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
TTC39AQ5SRH9 C1QL1P1-201ENST00000568105 661 ntBASIC23.94■■□□□ 1.42
TTC39AQ5SRH9 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC23.94■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms