Protein–RNA interactions for Protein: Q494W8

CHRFAM7A, CHRNA7-FAM7A fusion protein, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7AQ494W8 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC17.17■□□□□ 0.34
CHRFAM7AQ494W8 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC17.17■□□□□ 0.34
CHRFAM7AQ494W8 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CHRFAM7AQ494W8 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CHRFAM7AQ494W8 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CHRFAM7AQ494W8 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
CHRFAM7AQ494W8 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC17.17■□□□□ 0.34
CHRFAM7AQ494W8 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CHRFAM7AQ494W8 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC17.17■□□□□ 0.34
CHRFAM7AQ494W8 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
CHRFAM7AQ494W8 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC17.16■□□□□ 0.34
CHRFAM7AQ494W8 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CHRFAM7AQ494W8 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CHRFAM7AQ494W8 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CHRFAM7AQ494W8 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CHRFAM7AQ494W8 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC17.16■□□□□ 0.34
CHRFAM7AQ494W8 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CHRFAM7AQ494W8 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CHRFAM7AQ494W8 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CHRFAM7AQ494W8 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
CHRFAM7AQ494W8 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC17.16■□□□□ 0.34
CHRFAM7AQ494W8 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC17.16■□□□□ 0.34
CHRFAM7AQ494W8 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC17.16■□□□□ 0.34
CHRFAM7AQ494W8 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC17.16■□□□□ 0.34
CHRFAM7AQ494W8 C1QBPP2-201ENST00000528754 825 ntBASIC17.16■□□□□ 0.34
CHRFAM7AQ494W8 RNF121-214ENST00000533380 870 ntTSL 3 BASIC17.16■□□□□ 0.34
CHRFAM7AQ494W8 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC17.16■□□□□ 0.34
CHRFAM7AQ494W8 LINC01023-201ENST00000606054 436 ntBASIC17.16■□□□□ 0.34
CHRFAM7AQ494W8 REXO1L12P-201ENST00000622156 912 ntBASIC17.16■□□□□ 0.34
CHRFAM7AQ494W8 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC17.16■□□□□ 0.34
CHRFAM7AQ494W8 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
CHRFAM7AQ494W8 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CHRFAM7AQ494W8 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CHRFAM7AQ494W8 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CHRFAM7AQ494W8 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CHRFAM7AQ494W8 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC17.16■□□□□ 0.34
CHRFAM7AQ494W8 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC17.16■□□□□ 0.34
CHRFAM7AQ494W8 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC17.16■□□□□ 0.34
CHRFAM7AQ494W8 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CHRFAM7AQ494W8 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC17.16■□□□□ 0.34
CHRFAM7AQ494W8 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
CHRFAM7AQ494W8 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
CHRFAM7AQ494W8 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CHRFAM7AQ494W8 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
CHRFAM7AQ494W8 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
CHRFAM7AQ494W8 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC17.16■□□□□ 0.34
CHRFAM7AQ494W8 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CHRFAM7AQ494W8 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CHRFAM7AQ494W8 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CHRFAM7AQ494W8 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CHRFAM7AQ494W8 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC17.15■□□□□ 0.34
CHRFAM7AQ494W8 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
CHRFAM7AQ494W8 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
CHRFAM7AQ494W8 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
CHRFAM7AQ494W8 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CHRFAM7AQ494W8 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CHRFAM7AQ494W8 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC17.15■□□□□ 0.34
CHRFAM7AQ494W8 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC17.15■□□□□ 0.34
CHRFAM7AQ494W8 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
CHRFAM7AQ494W8 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CHRFAM7AQ494W8 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC17.15■□□□□ 0.34
CHRFAM7AQ494W8 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
CHRFAM7AQ494W8 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC17.15■□□□□ 0.34
CHRFAM7AQ494W8 RPPH1-201ENST00000516869 333 ntBASIC17.15■□□□□ 0.34
CHRFAM7AQ494W8 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC17.15■□□□□ 0.34
CHRFAM7AQ494W8 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC17.15■□□□□ 0.34
CHRFAM7AQ494W8 AC010331.1-201ENST00000611423 582 ntBASIC17.15■□□□□ 0.34
CHRFAM7AQ494W8 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
CHRFAM7AQ494W8 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
CHRFAM7AQ494W8 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC17.15■□□□□ 0.34
CHRFAM7AQ494W8 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
CHRFAM7AQ494W8 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CHRFAM7AQ494W8 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC17.15■□□□□ 0.34
CHRFAM7AQ494W8 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
CHRFAM7AQ494W8 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC17.15■□□□□ 0.34
CHRFAM7AQ494W8 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.34
CHRFAM7AQ494W8 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.34
CHRFAM7AQ494W8 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
CHRFAM7AQ494W8 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
CHRFAM7AQ494W8 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
CHRFAM7AQ494W8 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CHRFAM7AQ494W8 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CHRFAM7AQ494W8 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CHRFAM7AQ494W8 KRT16P2-201ENST00000414673 1423 ntBASIC17.14■□□□□ 0.33
CHRFAM7AQ494W8 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CHRFAM7AQ494W8 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CHRFAM7AQ494W8 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CHRFAM7AQ494W8 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC17.14■□□□□ 0.33
CHRFAM7AQ494W8 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CHRFAM7AQ494W8 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CHRFAM7AQ494W8 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC17.14■□□□□ 0.33
CHRFAM7AQ494W8 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CHRFAM7AQ494W8 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
CHRFAM7AQ494W8 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
CHRFAM7AQ494W8 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
CHRFAM7AQ494W8 AC211429.1-201ENST00000415277 523 ntBASIC17.14■□□□□ 0.33
CHRFAM7AQ494W8 KRT17P3-201ENST00000420566 1262 ntBASIC17.14■□□□□ 0.33
CHRFAM7AQ494W8 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC17.14■□□□□ 0.33
CHRFAM7AQ494W8 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC17.14■□□□□ 0.33
CHRFAM7AQ494W8 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms