Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
HIST1H1AQ02539 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
HIST1H1AQ02539 TMEM179-206ENST00000616017 1645 ntBASIC15.03■□□□□ -0
HIST1H1AQ02539 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC15.03■□□□□ -0
HIST1H1AQ02539 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
HIST1H1AQ02539 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
HIST1H1AQ02539 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
HIST1H1AQ02539 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
HIST1H1AQ02539 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
HIST1H1AQ02539 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC15.02■□□□□ -0
HIST1H1AQ02539 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
HIST1H1AQ02539 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
HIST1H1AQ02539 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC15.02■□□□□ -0
HIST1H1AQ02539 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
HIST1H1AQ02539 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
HIST1H1AQ02539 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
HIST1H1AQ02539 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
HIST1H1AQ02539 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
HIST1H1AQ02539 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
HIST1H1AQ02539 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
HIST1H1AQ02539 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC15.02■□□□□ -0
HIST1H1AQ02539 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
HIST1H1AQ02539 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC15.02■□□□□ -0
HIST1H1AQ02539 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC15.02■□□□□ -0
HIST1H1AQ02539 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
HIST1H1AQ02539 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC15.02■□□□□ -0
HIST1H1AQ02539 AC011767.1-201ENST00000617410 1153 ntBASIC15.02■□□□□ -0
HIST1H1AQ02539 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02□□□□□ -0.01
HIST1H1AQ02539 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC15.02□□□□□ -0.01
HIST1H1AQ02539 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
HIST1H1AQ02539 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC15.02□□□□□ -0.01
HIST1H1AQ02539 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
HIST1H1AQ02539 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
HIST1H1AQ02539 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
HIST1H1AQ02539 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
HIST1H1AQ02539 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
HIST1H1AQ02539 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC15.02□□□□□ -0.01
HIST1H1AQ02539 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC15.02□□□□□ -0.01
HIST1H1AQ02539 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC15.02□□□□□ -0.01
HIST1H1AQ02539 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
HIST1H1AQ02539 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HIST1H1AQ02539 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
HIST1H1AQ02539 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC15.01□□□□□ -0.01
HIST1H1AQ02539 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC15.01□□□□□ -0.01
HIST1H1AQ02539 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
HIST1H1AQ02539 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HIST1H1AQ02539 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
HIST1H1AQ02539 LBX2-AS1-202ENST00000603175 2083 ntBASIC15.01□□□□□ -0.01
HIST1H1AQ02539 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
HIST1H1AQ02539 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HIST1H1AQ02539 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HIST1H1AQ02539 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
HIST1H1AQ02539 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HIST1H1AQ02539 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
HIST1H1AQ02539 AC026271.2-201ENST00000428091 497 ntBASIC15.01□□□□□ -0.01
HIST1H1AQ02539 RARRES2P4-201ENST00000514074 484 ntBASIC15.01□□□□□ -0.01
HIST1H1AQ02539 MIR5787-201ENST00000611784 55 ntBASIC15.01□□□□□ -0.01
HIST1H1AQ02539 BID-214ENST00000617586 542 ntTSL 5 BASIC15.01□□□□□ -0.01
HIST1H1AQ02539 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
HIST1H1AQ02539 AC008694.1-202ENST00000636953 945 ntBASIC15.01□□□□□ -0.01
HIST1H1AQ02539 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HIST1H1AQ02539 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
HIST1H1AQ02539 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC15.01□□□□□ -0.01
HIST1H1AQ02539 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HIST1H1AQ02539 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC15.01□□□□□ -0.01
HIST1H1AQ02539 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
HIST1H1AQ02539 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
HIST1H1AQ02539 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC15.01□□□□□ -0.01
HIST1H1AQ02539 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HIST1H1AQ02539 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
HIST1H1AQ02539 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
HIST1H1AQ02539 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
HIST1H1AQ02539 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
HIST1H1AQ02539 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC15□□□□□ -0.01
HIST1H1AQ02539 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
HIST1H1AQ02539 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC15□□□□□ -0.01
HIST1H1AQ02539 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
HIST1H1AQ02539 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
HIST1H1AQ02539 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC15□□□□□ -0.01
HIST1H1AQ02539 AC116562.4-201ENST00000641316 2276 ntBASIC15□□□□□ -0.01
HIST1H1AQ02539 WAC-202ENST00000347934 2839 ntTSL 5 BASIC15□□□□□ -0.01
HIST1H1AQ02539 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC15□□□□□ -0.01
HIST1H1AQ02539 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
HIST1H1AQ02539 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
HIST1H1AQ02539 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC15□□□□□ -0.01
HIST1H1AQ02539 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
HIST1H1AQ02539 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC15□□□□□ -0.01
HIST1H1AQ02539 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC15□□□□□ -0.01
HIST1H1AQ02539 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC15□□□□□ -0.01
HIST1H1AQ02539 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
HIST1H1AQ02539 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
HIST1H1AQ02539 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
HIST1H1AQ02539 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
HIST1H1AQ02539 MCRIP2P1-201ENST00000394346 511 ntBASIC15□□□□□ -0.01
HIST1H1AQ02539 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC15□□□□□ -0.01
HIST1H1AQ02539 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC15□□□□□ -0.01
HIST1H1AQ02539 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC15□□□□□ -0.01
HIST1H1AQ02539 PLLP-204ENST00000569059 665 ntTSL 3 BASIC15□□□□□ -0.01
HIST1H1AQ02539 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC15□□□□□ -0.01
HIST1H1AQ02539 AC069236.1-201ENST00000604339 616 ntBASIC15□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms