Protein–RNA interactions for Protein: Q00532

CDKL1, Cyclin-dependent kinase-like 1, humanhuman

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL1Q00532 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC19.34■□□□□ 0.69
CDKL1Q00532 PFKL-212ENST00000628044 129 ntTSL 3 BASIC19.34■□□□□ 0.69
CDKL1Q00532 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC19.34■□□□□ 0.69
CDKL1Q00532 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CDKL1Q00532 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
CDKL1Q00532 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CDKL1Q00532 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CDKL1Q00532 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CDKL1Q00532 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CDKL1Q00532 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC19.34■□□□□ 0.69
CDKL1Q00532 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC19.34■□□□□ 0.69
CDKL1Q00532 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CDKL1Q00532 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CDKL1Q00532 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
CDKL1Q00532 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC19.33■□□□□ 0.69
CDKL1Q00532 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CDKL1Q00532 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
CDKL1Q00532 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC19.33■□□□□ 0.68
CDKL1Q00532 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
CDKL1Q00532 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC19.33■□□□□ 0.68
CDKL1Q00532 RHEB-204ENST00000472642 900 ntTSL 3 BASIC19.33■□□□□ 0.68
CDKL1Q00532 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC19.33■□□□□ 0.68
CDKL1Q00532 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC19.33■□□□□ 0.68
CDKL1Q00532 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC19.33■□□□□ 0.68
CDKL1Q00532 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC19.33■□□□□ 0.68
CDKL1Q00532 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC19.33■□□□□ 0.68
CDKL1Q00532 AL158211.5-201ENST00000623583 2518 ntBASIC19.33■□□□□ 0.68
CDKL1Q00532 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CDKL1Q00532 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CDKL1Q00532 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CDKL1Q00532 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
CDKL1Q00532 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC19.33■□□□□ 0.68
CDKL1Q00532 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
CDKL1Q00532 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CDKL1Q00532 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDKL1Q00532 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDKL1Q00532 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC19.32■□□□□ 0.68
CDKL1Q00532 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC19.32■□□□□ 0.68
CDKL1Q00532 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
CDKL1Q00532 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC19.32■□□□□ 0.68
CDKL1Q00532 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDKL1Q00532 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDKL1Q00532 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC19.32■□□□□ 0.68
CDKL1Q00532 AL390719.1-204ENST00000412397 1219 ntBASIC19.32■□□□□ 0.68
CDKL1Q00532 AC097658.1-201ENST00000475555 843 ntBASIC19.32■□□□□ 0.68
CDKL1Q00532 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC19.32■□□□□ 0.68
CDKL1Q00532 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CDKL1Q00532 BET1L-207ENST00000529614 560 ntTSL 5 BASIC19.32■□□□□ 0.68
CDKL1Q00532 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC19.32■□□□□ 0.68
CDKL1Q00532 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC19.32■□□□□ 0.68
CDKL1Q00532 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC19.32■□□□□ 0.68
CDKL1Q00532 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC19.32■□□□□ 0.68
CDKL1Q00532 GXYLT1P5-201ENST00000614548 1189 ntBASIC19.32■□□□□ 0.68
CDKL1Q00532 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
CDKL1Q00532 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
CDKL1Q00532 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CDKL1Q00532 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDKL1Q00532 AC026471.1-201ENST00000564629 3026 ntBASIC19.32■□□□□ 0.68
CDKL1Q00532 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
CDKL1Q00532 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDKL1Q00532 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
CDKL1Q00532 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
CDKL1Q00532 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDKL1Q00532 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
CDKL1Q00532 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
CDKL1Q00532 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC19.31■□□□□ 0.68
CDKL1Q00532 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDKL1Q00532 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC19.31■□□□□ 0.68
CDKL1Q00532 GGT1-206ENST00000404223 952 ntTSL 2 BASIC19.31■□□□□ 0.68
CDKL1Q00532 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC19.31■□□□□ 0.68
CDKL1Q00532 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDKL1Q00532 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDKL1Q00532 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC19.31■□□□□ 0.68
CDKL1Q00532 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDKL1Q00532 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC19.31■□□□□ 0.68
CDKL1Q00532 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDKL1Q00532 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDKL1Q00532 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDKL1Q00532 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CDKL1Q00532 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDKL1Q00532 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDKL1Q00532 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
CDKL1Q00532 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC19.31■□□□□ 0.68
CDKL1Q00532 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CDKL1Q00532 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC19.31■□□□□ 0.68
CDKL1Q00532 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDKL1Q00532 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
CDKL1Q00532 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CDKL1Q00532 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC19.3■□□□□ 0.68
CDKL1Q00532 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDKL1Q00532 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC19.3■□□□□ 0.68
CDKL1Q00532 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDKL1Q00532 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
CDKL1Q00532 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CDKL1Q00532 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDKL1Q00532 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDKL1Q00532 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
CDKL1Q00532 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDKL1Q00532 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDKL1Q00532 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms