Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC15.83■□□□□ 0.12
CX3CL1P78423 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC15.83■□□□□ 0.12
CX3CL1P78423 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
CX3CL1P78423 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC15.83■□□□□ 0.12
CX3CL1P78423 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CX3CL1P78423 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CX3CL1P78423 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC15.82■□□□□ 0.12
CX3CL1P78423 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
CX3CL1P78423 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC15.82■□□□□ 0.12
CX3CL1P78423 TCF3P1-201ENST00000423021 1937 ntBASIC15.82■□□□□ 0.12
CX3CL1P78423 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC15.82■□□□□ 0.12
CX3CL1P78423 AL691432.2-201ENST00000607222 2038 ntBASIC15.82■□□□□ 0.12
CX3CL1P78423 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC15.82■□□□□ 0.12
CX3CL1P78423 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CX3CL1P78423 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC15.82■□□□□ 0.12
CX3CL1P78423 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC15.82■□□□□ 0.12
CX3CL1P78423 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC15.82■□□□□ 0.12
CX3CL1P78423 GGT1-206ENST00000404223 952 ntTSL 2 BASIC15.82■□□□□ 0.12
CX3CL1P78423 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC15.82■□□□□ 0.12
CX3CL1P78423 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CX3CL1P78423 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CX3CL1P78423 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CX3CL1P78423 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
CX3CL1P78423 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CX3CL1P78423 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
CX3CL1P78423 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC15.82■□□□□ 0.12
CX3CL1P78423 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
CX3CL1P78423 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CX3CL1P78423 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CX3CL1P78423 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
CX3CL1P78423 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CX3CL1P78423 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CX3CL1P78423 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC15.82■□□□□ 0.12
CX3CL1P78423 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CX3CL1P78423 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
CX3CL1P78423 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CX3CL1P78423 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC15.82■□□□□ 0.12
CX3CL1P78423 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
CX3CL1P78423 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CX3CL1P78423 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
CX3CL1P78423 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CX3CL1P78423 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC15.81■□□□□ 0.12
CX3CL1P78423 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
CX3CL1P78423 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CX3CL1P78423 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CX3CL1P78423 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CX3CL1P78423 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CX3CL1P78423 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
CX3CL1P78423 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CX3CL1P78423 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CX3CL1P78423 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CX3CL1P78423 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CX3CL1P78423 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CX3CL1P78423 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CX3CL1P78423 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC15.81■□□□□ 0.12
CX3CL1P78423 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CX3CL1P78423 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC15.81■□□□□ 0.12
CX3CL1P78423 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
CX3CL1P78423 APTR-205ENST00000447009 902 ntTSL 2 BASIC15.81■□□□□ 0.12
CX3CL1P78423 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC15.81■□□□□ 0.12
CX3CL1P78423 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CX3CL1P78423 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CX3CL1P78423 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC15.81■□□□□ 0.12
CX3CL1P78423 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CX3CL1P78423 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CX3CL1P78423 AC005829.2-201ENST00000571422 1056 ntBASIC15.81■□□□□ 0.12
CX3CL1P78423 AC092368.3-202ENST00000574180 1591 ntBASIC15.81■□□□□ 0.12
CX3CL1P78423 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CX3CL1P78423 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC15.81■□□□□ 0.12
CX3CL1P78423 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CX3CL1P78423 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CX3CL1P78423 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CX3CL1P78423 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CX3CL1P78423 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CX3CL1P78423 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC15.8■□□□□ 0.12
CX3CL1P78423 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC15.8■□□□□ 0.12
CX3CL1P78423 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CX3CL1P78423 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CX3CL1P78423 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
CX3CL1P78423 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CX3CL1P78423 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CX3CL1P78423 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CX3CL1P78423 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CX3CL1P78423 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CX3CL1P78423 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC15.8■□□□□ 0.12
CX3CL1P78423 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
CX3CL1P78423 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC15.8■□□□□ 0.12
CX3CL1P78423 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CX3CL1P78423 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC15.8■□□□□ 0.12
CX3CL1P78423 REXO2-208ENST00000539754 791 ntTSL 2 BASIC15.8■□□□□ 0.12
CX3CL1P78423 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC15.8■□□□□ 0.12
CX3CL1P78423 KLF13-207ENST00000560473 489 ntTSL 3 BASIC15.8■□□□□ 0.12
CX3CL1P78423 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC15.8■□□□□ 0.12
CX3CL1P78423 AC060766.5-201ENST00000590539 871 ntBASIC15.8■□□□□ 0.12
CX3CL1P78423 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CX3CL1P78423 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
CX3CL1P78423 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CX3CL1P78423 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
CX3CL1P78423 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CX3CL1P78423 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms