Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC17.92■□□□□ 0.46
CXCR4P61073 AC005332.8-201ENST00000622750 2735 ntBASIC17.92■□□□□ 0.46
CXCR4P61073 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
CXCR4P61073 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CXCR4P61073 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CXCR4P61073 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC17.92■□□□□ 0.46
CXCR4P61073 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC17.92■□□□□ 0.46
CXCR4P61073 AC091799.1-201ENST00000422823 811 ntBASIC17.92■□□□□ 0.46
CXCR4P61073 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC17.92■□□□□ 0.46
CXCR4P61073 KRT18P20-201ENST00000548986 1279 ntBASIC17.92■□□□□ 0.46
CXCR4P61073 FGF8-207ENST00000618991 856 ntTSL 3 BASIC17.92■□□□□ 0.46
CXCR4P61073 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CXCR4P61073 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC17.92■□□□□ 0.46
CXCR4P61073 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CXCR4P61073 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CXCR4P61073 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CXCR4P61073 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CXCR4P61073 AC104581.1-202ENST00000635932 2618 ntBASIC17.92■□□□□ 0.46
CXCR4P61073 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CXCR4P61073 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CXCR4P61073 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CXCR4P61073 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
CXCR4P61073 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC17.91■□□□□ 0.46
CXCR4P61073 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
CXCR4P61073 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CXCR4P61073 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CXCR4P61073 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CXCR4P61073 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC17.91■□□□□ 0.46
CXCR4P61073 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CXCR4P61073 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
CXCR4P61073 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC17.91■□□□□ 0.46
CXCR4P61073 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CXCR4P61073 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CXCR4P61073 SAPCD2P1-201ENST00000395413 1184 ntBASIC17.91■□□□□ 0.46
CXCR4P61073 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC17.91■□□□□ 0.46
CXCR4P61073 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC17.91■□□□□ 0.46
CXCR4P61073 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CXCR4P61073 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC17.91■□□□□ 0.46
CXCR4P61073 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CXCR4P61073 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC17.91■□□□□ 0.46
CXCR4P61073 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CXCR4P61073 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CXCR4P61073 AC006333.2-201ENST00000607957 2099 ntBASIC17.91■□□□□ 0.46
CXCR4P61073 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CXCR4P61073 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC17.9■□□□□ 0.46
CXCR4P61073 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC17.9■□□□□ 0.46
CXCR4P61073 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CXCR4P61073 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC17.9■□□□□ 0.46
CXCR4P61073 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
CXCR4P61073 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC17.9■□□□□ 0.46
CXCR4P61073 AC090164.3-201ENST00000610780 2143 ntBASIC17.9■□□□□ 0.46
CXCR4P61073 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
CXCR4P61073 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC17.9■□□□□ 0.46
CXCR4P61073 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17.9■□□□□ 0.46
CXCR4P61073 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC17.9■□□□□ 0.46
CXCR4P61073 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
CXCR4P61073 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CXCR4P61073 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CXCR4P61073 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CXCR4P61073 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
CXCR4P61073 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC17.9■□□□□ 0.46
CXCR4P61073 TESC-206ENST00000541210 936 ntTSL 3 BASIC17.9■□□□□ 0.46
CXCR4P61073 AC005837.3-201ENST00000612163 286 ntBASIC17.9■□□□□ 0.46
CXCR4P61073 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC17.9■□□□□ 0.46
CXCR4P61073 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CXCR4P61073 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CXCR4P61073 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CXCR4P61073 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC17.9■□□□□ 0.46
CXCR4P61073 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
CXCR4P61073 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC17.89■□□□□ 0.46
CXCR4P61073 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CXCR4P61073 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC17.89■□□□□ 0.45
CXCR4P61073 AL161938.1-201ENST00000569833 2180 ntBASIC17.89■□□□□ 0.45
CXCR4P61073 AK1-201ENST00000223836 736 ntTSL 3 BASIC17.89■□□□□ 0.45
CXCR4P61073 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CXCR4P61073 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC17.89■□□□□ 0.45
CXCR4P61073 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC17.89■□□□□ 0.45
CXCR4P61073 AC243732.1-201ENST00000612648 864 ntBASIC17.89■□□□□ 0.45
CXCR4P61073 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
CXCR4P61073 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
CXCR4P61073 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC17.89■□□□□ 0.45
CXCR4P61073 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC17.89■□□□□ 0.45
CXCR4P61073 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CXCR4P61073 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CXCR4P61073 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
CXCR4P61073 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC17.89■□□□□ 0.45
CXCR4P61073 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CXCR4P61073 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC17.89■□□□□ 0.45
CXCR4P61073 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CXCR4P61073 RBM17P2-201ENST00000616397 1405 ntBASIC17.89■□□□□ 0.45
CXCR4P61073 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CXCR4P61073 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC17.88■□□□□ 0.45
CXCR4P61073 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
CXCR4P61073 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
CXCR4P61073 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC17.88■□□□□ 0.45
CXCR4P61073 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
CXCR4P61073 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC17.88■□□□□ 0.45
CXCR4P61073 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC17.88■□□□□ 0.45
CXCR4P61073 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CXCR4P61073 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms