Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC19.46■□□□□ 0.71
CLDN2P57739 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CLDN2P57739 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CLDN2P57739 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CLDN2P57739 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CLDN2P57739 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CLDN2P57739 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC19.45■□□□□ 0.7
CLDN2P57739 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC19.45■□□□□ 0.7
CLDN2P57739 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
CLDN2P57739 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CLDN2P57739 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
CLDN2P57739 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC19.45■□□□□ 0.7
CLDN2P57739 MIR1224-201ENST00000408193 85 ntBASIC19.45■□□□□ 0.7
CLDN2P57739 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC19.45■□□□□ 0.7
CLDN2P57739 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC19.45■□□□□ 0.7
CLDN2P57739 ABBA01031674.1-201ENST00000635145 728 ntBASIC19.45■□□□□ 0.7
CLDN2P57739 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC19.45■□□□□ 0.7
CLDN2P57739 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CLDN2P57739 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CLDN2P57739 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
CLDN2P57739 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CLDN2P57739 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CLDN2P57739 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CLDN2P57739 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CLDN2P57739 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CLDN2P57739 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC19.44■□□□□ 0.7
CLDN2P57739 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CLDN2P57739 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CLDN2P57739 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CLDN2P57739 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CLDN2P57739 MIR6786-201ENST00000616843 113 ntBASIC19.44■□□□□ 0.7
CLDN2P57739 AL031985.4-201ENST00000642138 673 ntBASIC19.44■□□□□ 0.7
CLDN2P57739 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CLDN2P57739 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CLDN2P57739 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC19.44■□□□□ 0.7
CLDN2P57739 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CLDN2P57739 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC19.44■□□□□ 0.7
CLDN2P57739 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CLDN2P57739 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC19.44■□□□□ 0.7
CLDN2P57739 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CLDN2P57739 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CLDN2P57739 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CLDN2P57739 RCN1P1-201ENST00000400413 996 ntBASIC19.43■□□□□ 0.7
CLDN2P57739 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC19.43■□□□□ 0.7
CLDN2P57739 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC19.43■□□□□ 0.7
CLDN2P57739 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC19.43■□□□□ 0.7
CLDN2P57739 PPOX-219ENST00000544598 813 ntTSL 2 BASIC19.43■□□□□ 0.7
CLDN2P57739 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC19.43■□□□□ 0.7
CLDN2P57739 AL445675.2-201ENST00000620291 557 ntBASIC19.43■□□□□ 0.7
CLDN2P57739 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CLDN2P57739 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC19.43■□□□□ 0.7
CLDN2P57739 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CLDN2P57739 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CLDN2P57739 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CLDN2P57739 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CLDN2P57739 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC19.43■□□□□ 0.7
CLDN2P57739 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
CLDN2P57739 AL391422.3-201ENST00000603791 2761 ntBASIC19.43■□□□□ 0.7
CLDN2P57739 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CLDN2P57739 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CLDN2P57739 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC19.42■□□□□ 0.7
CLDN2P57739 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CLDN2P57739 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC19.42■□□□□ 0.7
CLDN2P57739 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CLDN2P57739 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CLDN2P57739 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CLDN2P57739 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CLDN2P57739 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC19.42■□□□□ 0.7
CLDN2P57739 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC19.42■□□□□ 0.7
CLDN2P57739 PPP1R14BP5-201ENST00000440334 435 ntBASIC19.42■□□□□ 0.7
CLDN2P57739 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC19.42■□□□□ 0.7
CLDN2P57739 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC19.42■□□□□ 0.7
CLDN2P57739 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC19.42■□□□□ 0.7
CLDN2P57739 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CLDN2P57739 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CLDN2P57739 AL512408.1-201ENST00000569378 2000 ntBASIC19.42■□□□□ 0.7
CLDN2P57739 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
CLDN2P57739 CYP2D8P-201ENST00000433633 1490 ntBASIC19.41■□□□□ 0.7
CLDN2P57739 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLDN2P57739 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLDN2P57739 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLDN2P57739 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
CLDN2P57739 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CLDN2P57739 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC19.41■□□□□ 0.7
CLDN2P57739 MESTP1-201ENST00000404287 994 ntBASIC19.41■□□□□ 0.7
CLDN2P57739 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC19.41■□□□□ 0.7
CLDN2P57739 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC19.41■□□□□ 0.7
CLDN2P57739 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
CLDN2P57739 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
CLDN2P57739 GLDC-219ENST00000640208 420 ntTSL 2 BASIC19.41■□□□□ 0.7
CLDN2P57739 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLDN2P57739 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
CLDN2P57739 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CLDN2P57739 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLDN2P57739 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLDN2P57739 MOK-225ENST00000522867 1883 ntTSL 5 BASIC19.41■□□□□ 0.7
CLDN2P57739 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLDN2P57739 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLDN2P57739 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
CLDN2P57739 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms