Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
CLDN6P56747 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLDN6P56747 HIST1H2APS4-201ENST00000362070 348 ntBASIC18.92■□□□□ 0.62
CLDN6P56747 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLDN6P56747 BX664615.1-201ENST00000443558 458 ntBASIC18.92■□□□□ 0.62
CLDN6P56747 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC18.92■□□□□ 0.62
CLDN6P56747 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC18.92■□□□□ 0.62
CLDN6P56747 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLDN6P56747 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
CLDN6P56747 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLDN6P56747 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLDN6P56747 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLDN6P56747 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLDN6P56747 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC18.92■□□□□ 0.62
CLDN6P56747 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC18.91■□□□□ 0.62
CLDN6P56747 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLDN6P56747 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
CLDN6P56747 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLDN6P56747 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC18.91■□□□□ 0.62
CLDN6P56747 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC18.91■□□□□ 0.62
CLDN6P56747 CD70-202ENST00000423145 881 ntTSL 2 BASIC18.91■□□□□ 0.62
CLDN6P56747 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC18.91■□□□□ 0.62
CLDN6P56747 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC18.91■□□□□ 0.62
CLDN6P56747 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC18.91■□□□□ 0.62
CLDN6P56747 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC18.91■□□□□ 0.62
CLDN6P56747 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CLDN6P56747 AC026271.3-201ENST00000571884 352 ntBASIC18.91■□□□□ 0.62
CLDN6P56747 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC18.91■□□□□ 0.62
CLDN6P56747 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
CLDN6P56747 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLDN6P56747 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLDN6P56747 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLDN6P56747 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLDN6P56747 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CLDN6P56747 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
CLDN6P56747 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLDN6P56747 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC18.9■□□□□ 0.62
CLDN6P56747 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC18.9■□□□□ 0.62
CLDN6P56747 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLDN6P56747 PLK5-205ENST00000642079 1969 ntBASIC18.9■□□□□ 0.62
CLDN6P56747 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLDN6P56747 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLDN6P56747 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC18.9■□□□□ 0.62
CLDN6P56747 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
CLDN6P56747 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC18.9■□□□□ 0.62
CLDN6P56747 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLDN6P56747 AL031133.1-201ENST00000406807 723 ntBASIC18.9■□□□□ 0.62
CLDN6P56747 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC18.9■□□□□ 0.62
CLDN6P56747 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLDN6P56747 KRT18P56-201ENST00000507275 550 ntBASIC18.9■□□□□ 0.62
CLDN6P56747 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLDN6P56747 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC18.9■□□□□ 0.62
CLDN6P56747 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLDN6P56747 AC005229.4-201ENST00000610085 2198 ntBASIC18.9■□□□□ 0.62
CLDN6P56747 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC18.9■□□□□ 0.62
CLDN6P56747 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC18.9■□□□□ 0.62
CLDN6P56747 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLDN6P56747 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
CLDN6P56747 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLDN6P56747 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
CLDN6P56747 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
CLDN6P56747 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CLDN6P56747 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CLDN6P56747 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC18.89■□□□□ 0.61
CLDN6P56747 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CLDN6P56747 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
CLDN6P56747 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC18.89■□□□□ 0.61
CLDN6P56747 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC18.89■□□□□ 0.61
CLDN6P56747 AC091390.4-202ENST00000476426 537 ntBASIC18.89■□□□□ 0.61
CLDN6P56747 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CLDN6P56747 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC18.89■□□□□ 0.61
CLDN6P56747 DGCR10-201ENST00000609839 495 ntBASIC18.89■□□□□ 0.61
CLDN6P56747 AC091076.1-201ENST00000610741 619 ntBASIC18.89■□□□□ 0.61
CLDN6P56747 MYC-208ENST00000641036 567 ntBASIC18.89■□□□□ 0.61
CLDN6P56747 AF106564.1-201ENST00000607058 2553 ntBASIC18.89■□□□□ 0.61
CLDN6P56747 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
CLDN6P56747 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CLDN6P56747 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CLDN6P56747 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CLDN6P56747 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
CLDN6P56747 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
CLDN6P56747 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CLDN6P56747 DPP3P2-201ENST00000416030 1696 ntBASIC18.89■□□□□ 0.61
CLDN6P56747 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC18.88■□□□□ 0.61
CLDN6P56747 USP48-205ENST00000421625 2818 ntTSL 2 BASIC18.88■□□□□ 0.61
CLDN6P56747 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLDN6P56747 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
CLDN6P56747 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLDN6P56747 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLDN6P56747 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLDN6P56747 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
CLDN6P56747 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
CLDN6P56747 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CLDN6P56747 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC18.88■□□□□ 0.61
CLDN6P56747 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLDN6P56747 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC18.88■□□□□ 0.61
CLDN6P56747 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
CLDN6P56747 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC18.88■□□□□ 0.61
CLDN6P56747 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CLDN6P56747 AC128688.1-201ENST00000487626 519 ntBASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms