Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 GOLGA6L3-201ENST00000507199 1679 ntBASIC17.85■□□□□ 0.45
SUMO3P55854 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC17.85■□□□□ 0.45
SUMO3P55854 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SUMO3P55854 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC17.85■□□□□ 0.45
SUMO3P55854 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC17.85■□□□□ 0.45
SUMO3P55854 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SUMO3P55854 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC17.85■□□□□ 0.45
SUMO3P55854 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC17.84■□□□□ 0.45
SUMO3P55854 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SUMO3P55854 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
SUMO3P55854 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SUMO3P55854 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SUMO3P55854 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC17.84■□□□□ 0.45
SUMO3P55854 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
SUMO3P55854 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC17.84■□□□□ 0.45
SUMO3P55854 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC17.84■□□□□ 0.45
SUMO3P55854 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SUMO3P55854 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SUMO3P55854 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
SUMO3P55854 AC239809.2-201ENST00000415381 517 ntBASIC17.84■□□□□ 0.45
SUMO3P55854 AC128676.1-201ENST00000454392 318 ntBASIC17.84■□□□□ 0.45
SUMO3P55854 KRT18P16-201ENST00000510337 1294 ntBASIC17.84■□□□□ 0.45
SUMO3P55854 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SUMO3P55854 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
SUMO3P55854 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SUMO3P55854 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SUMO3P55854 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC17.84■□□□□ 0.45
SUMO3P55854 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
SUMO3P55854 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SUMO3P55854 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
SUMO3P55854 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
SUMO3P55854 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC17.83■□□□□ 0.45
SUMO3P55854 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SUMO3P55854 NBPF21P-201ENST00000425093 1451 ntBASIC17.83■□□□□ 0.45
SUMO3P55854 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.45
SUMO3P55854 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC17.83■□□□□ 0.45
SUMO3P55854 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC17.83■□□□□ 0.45
SUMO3P55854 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SUMO3P55854 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SUMO3P55854 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC17.83■□□□□ 0.44
SUMO3P55854 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
SUMO3P55854 NME1-207ENST00000480143 964 ntTSL 2 BASIC17.83■□□□□ 0.44
SUMO3P55854 RHOD-202ENST00000532559 538 ntTSL 3 BASIC17.83■□□□□ 0.44
SUMO3P55854 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC17.83■□□□□ 0.44
SUMO3P55854 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
SUMO3P55854 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC17.83■□□□□ 0.44
SUMO3P55854 AC233263.1-201ENST00000578059 224 ntBASIC17.83■□□□□ 0.44
SUMO3P55854 RN7SL471P-201ENST00000580476 299 ntBASIC17.83■□□□□ 0.44
SUMO3P55854 ITM2C-210ENST00000620962 501 ntBASIC17.83■□□□□ 0.44
SUMO3P55854 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SUMO3P55854 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC17.83■□□□□ 0.44
SUMO3P55854 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC17.83■□□□□ 0.44
SUMO3P55854 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC17.83■□□□□ 0.44
SUMO3P55854 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
SUMO3P55854 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SUMO3P55854 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SUMO3P55854 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
SUMO3P55854 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SUMO3P55854 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
SUMO3P55854 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
SUMO3P55854 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
SUMO3P55854 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC17.82■□□□□ 0.44
SUMO3P55854 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC17.82■□□□□ 0.44
SUMO3P55854 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SUMO3P55854 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SUMO3P55854 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SUMO3P55854 TSPY20P-201ENST00000450910 630 ntBASIC17.82■□□□□ 0.44
SUMO3P55854 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC17.82■□□□□ 0.44
SUMO3P55854 AC133681.1-201ENST00000465482 601 ntBASIC17.82■□□□□ 0.44
SUMO3P55854 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC17.82■□□□□ 0.44
SUMO3P55854 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC17.82■□□□□ 0.44
SUMO3P55854 AC004264.1-201ENST00000608354 794 ntBASIC17.82■□□□□ 0.44
SUMO3P55854 Six3os1_6.1-201ENST00000620790 196 ntBASIC17.82■□□□□ 0.44
SUMO3P55854 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC17.82■□□□□ 0.44
SUMO3P55854 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SUMO3P55854 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC17.82■□□□□ 0.44
SUMO3P55854 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SUMO3P55854 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC17.82■□□□□ 0.44
SUMO3P55854 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
SUMO3P55854 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC17.82■□□□□ 0.44
SUMO3P55854 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SUMO3P55854 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SUMO3P55854 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC17.82■□□□□ 0.44
SUMO3P55854 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC17.81■□□□□ 0.44
SUMO3P55854 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
SUMO3P55854 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
SUMO3P55854 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC17.81■□□□□ 0.44
SUMO3P55854 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
SUMO3P55854 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SUMO3P55854 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC17.81■□□□□ 0.44
SUMO3P55854 TUBB8P6-201ENST00000436895 1288 ntBASIC17.81■□□□□ 0.44
SUMO3P55854 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SUMO3P55854 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC17.81■□□□□ 0.44
SUMO3P55854 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
SUMO3P55854 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC17.81■□□□□ 0.44
SUMO3P55854 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SUMO3P55854 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC17.81■□□□□ 0.44
SUMO3P55854 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
SUMO3P55854 TREX1-205ENST00000625293 1783 ntBASIC17.81■□□□□ 0.44
SUMO3P55854 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms