Protein–RNA interactions for Protein: P55291

CDH15, Cadherin-15, humanhuman

Predictions only

Length 814 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH15P55291 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC18.3■□□□□ 0.52
CDH15P55291 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC18.3■□□□□ 0.52
CDH15P55291 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
CDH15P55291 AC092437.1-201ENST00000624794 1048 ntBASIC18.3■□□□□ 0.52
CDH15P55291 MIR2861-201ENST00000636310 90 ntBASIC18.3■□□□□ 0.52
CDH15P55291 DPP3P2-201ENST00000416030 1696 ntBASIC18.3■□□□□ 0.52
CDH15P55291 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDH15P55291 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CDH15P55291 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDH15P55291 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDH15P55291 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
CDH15P55291 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
CDH15P55291 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC18.3■□□□□ 0.52
CDH15P55291 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CDH15P55291 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC18.3■□□□□ 0.52
CDH15P55291 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDH15P55291 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
CDH15P55291 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDH15P55291 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDH15P55291 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
CDH15P55291 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDH15P55291 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDH15P55291 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC18.29■□□□□ 0.52
CDH15P55291 AC135050.7-201ENST00000624508 2218 ntBASIC18.29■□□□□ 0.52
CDH15P55291 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDH15P55291 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDH15P55291 NT5C3AP1-201ENST00000394500 1012 ntBASIC18.29■□□□□ 0.52
CDH15P55291 GXYLT1P2-201ENST00000433312 1230 ntBASIC18.29■□□□□ 0.52
CDH15P55291 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
CDH15P55291 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC18.29■□□□□ 0.52
CDH15P55291 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC18.29■□□□□ 0.52
CDH15P55291 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC18.29■□□□□ 0.52
CDH15P55291 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC18.29■□□□□ 0.52
CDH15P55291 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC18.29■□□□□ 0.52
CDH15P55291 AC105233.4-201ENST00000642045 216 ntBASIC18.29■□□□□ 0.52
CDH15P55291 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDH15P55291 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDH15P55291 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDH15P55291 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC18.29■□□□□ 0.52
CDH15P55291 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
CDH15P55291 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC18.29■□□□□ 0.52
CDH15P55291 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDH15P55291 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
CDH15P55291 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CDH15P55291 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC18.29■□□□□ 0.52
CDH15P55291 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CDH15P55291 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC18.28■□□□□ 0.52
CDH15P55291 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
CDH15P55291 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDH15P55291 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDH15P55291 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
CDH15P55291 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC18.28■□□□□ 0.52
CDH15P55291 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CDH15P55291 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC18.28■□□□□ 0.52
CDH15P55291 SMUG1P1-201ENST00000590640 811 ntBASIC18.28■□□□□ 0.52
CDH15P55291 NTF6G-201ENST00000591094 616 ntBASIC18.28■□□□□ 0.52
CDH15P55291 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CDH15P55291 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC18.28■□□□□ 0.52
CDH15P55291 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDH15P55291 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDH15P55291 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDH15P55291 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDH15P55291 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDH15P55291 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC18.28■□□□□ 0.52
CDH15P55291 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDH15P55291 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CDH15P55291 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDH15P55291 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CDH15P55291 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CDH15P55291 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
CDH15P55291 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC18.27■□□□□ 0.52
CDH15P55291 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC18.27■□□□□ 0.52
CDH15P55291 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC18.27■□□□□ 0.52
CDH15P55291 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC18.27■□□□□ 0.52
CDH15P55291 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC18.27■□□□□ 0.52
CDH15P55291 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CDH15P55291 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CDH15P55291 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CDH15P55291 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC18.27■□□□□ 0.52
CDH15P55291 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CDH15P55291 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC18.27■□□□□ 0.52
CDH15P55291 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CDH15P55291 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CDH15P55291 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC18.27■□□□□ 0.52
CDH15P55291 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
CDH15P55291 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CDH15P55291 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC18.27■□□□□ 0.52
CDH15P55291 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CDH15P55291 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CDH15P55291 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC18.27■□□□□ 0.52
CDH15P55291 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CDH15P55291 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CDH15P55291 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
CDH15P55291 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC18.27■□□□□ 0.51
CDH15P55291 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.51
CDH15P55291 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
CDH15P55291 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC18.27■□□□□ 0.51
CDH15P55291 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
CDH15P55291 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC18.26■□□□□ 0.51
CDH15P55291 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms