Protein–RNA interactions for Protein: P55036

PSMD4, 26S proteasome non-ATPase regulatory subunit 4, humanhuman

Known RBP Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4P55036 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PSMD4P55036 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
PSMD4P55036 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PSMD4P55036 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC18.3■□□□□ 0.52
PSMD4P55036 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PSMD4P55036 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC18.3■□□□□ 0.52
PSMD4P55036 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PSMD4P55036 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PSMD4P55036 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PSMD4P55036 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
PSMD4P55036 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
PSMD4P55036 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PSMD4P55036 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC18.3■□□□□ 0.52
PSMD4P55036 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PSMD4P55036 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
PSMD4P55036 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
PSMD4P55036 HES2-206ENST00000489730 730 ntTSL 2 BASIC18.3■□□□□ 0.52
PSMD4P55036 RNA5SP413-201ENST00000516373 109 ntBASIC18.3■□□□□ 0.52
PSMD4P55036 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PSMD4P55036 SOX15-203ENST00000570788 1093 ntBASIC18.3■□□□□ 0.52
PSMD4P55036 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC18.3■□□□□ 0.52
PSMD4P55036 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PSMD4P55036 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PSMD4P55036 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC18.3■□□□□ 0.52
PSMD4P55036 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC18.3■□□□□ 0.52
PSMD4P55036 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC18.3■□□□□ 0.52
PSMD4P55036 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PSMD4P55036 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
PSMD4P55036 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
PSMD4P55036 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PSMD4P55036 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC18.3■□□□□ 0.52
PSMD4P55036 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PSMD4P55036 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PSMD4P55036 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
PSMD4P55036 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18.29■□□□□ 0.52
PSMD4P55036 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PSMD4P55036 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
PSMD4P55036 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
PSMD4P55036 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PSMD4P55036 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
PSMD4P55036 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PSMD4P55036 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC18.29■□□□□ 0.52
PSMD4P55036 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC18.29■□□□□ 0.52
PSMD4P55036 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC18.29■□□□□ 0.52
PSMD4P55036 SLC29A4P2-201ENST00000504749 1089 ntBASIC18.29■□□□□ 0.52
PSMD4P55036 UNC93B5-201ENST00000530315 699 ntBASIC18.29■□□□□ 0.52
PSMD4P55036 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PSMD4P55036 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC18.29■□□□□ 0.52
PSMD4P55036 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PSMD4P55036 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC18.29■□□□□ 0.52
PSMD4P55036 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PSMD4P55036 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
PSMD4P55036 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PSMD4P55036 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PSMD4P55036 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PSMD4P55036 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PSMD4P55036 BID-204ENST00000399767 2129 ntTSL 2 BASIC18.29■□□□□ 0.52
PSMD4P55036 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
PSMD4P55036 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PSMD4P55036 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PSMD4P55036 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
PSMD4P55036 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC18.28■□□□□ 0.52
PSMD4P55036 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
PSMD4P55036 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PSMD4P55036 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
PSMD4P55036 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PSMD4P55036 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PSMD4P55036 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC18.28■□□□□ 0.52
PSMD4P55036 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC18.28■□□□□ 0.52
PSMD4P55036 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.28■□□□□ 0.52
PSMD4P55036 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PSMD4P55036 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
PSMD4P55036 UNC93B4-201ENST00000505679 747 ntBASIC18.28■□□□□ 0.52
PSMD4P55036 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
PSMD4P55036 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC18.28■□□□□ 0.52
PSMD4P55036 AC008687.6-201ENST00000596318 630 ntBASIC18.28■□□□□ 0.52
PSMD4P55036 AL121906.2-201ENST00000621597 723 ntBASIC18.28■□□□□ 0.52
PSMD4P55036 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC18.28■□□□□ 0.52
PSMD4P55036 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC18.28■□□□□ 0.52
PSMD4P55036 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PSMD4P55036 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC18.28■□□□□ 0.52
PSMD4P55036 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.28■□□□□ 0.52
PSMD4P55036 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PSMD4P55036 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PSMD4P55036 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC18.28■□□□□ 0.52
PSMD4P55036 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
PSMD4P55036 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PSMD4P55036 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC18.27■□□□□ 0.52
PSMD4P55036 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC18.27■□□□□ 0.52
PSMD4P55036 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PSMD4P55036 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PSMD4P55036 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PSMD4P55036 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.27■□□□□ 0.52
PSMD4P55036 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PSMD4P55036 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC18.27■□□□□ 0.52
PSMD4P55036 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
PSMD4P55036 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PSMD4P55036 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PSMD4P55036 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PSMD4P55036 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms