Protein–RNA interactions for Protein: P54687

BCAT1, Branched-chain-amino-acid aminotransferase, cytosolic, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCAT1P54687 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
BCAT1P54687 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC20.77■□□□□ 0.92
BCAT1P54687 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC20.77■□□□□ 0.92
BCAT1P54687 AC110285.5-201ENST00000611501 352 ntBASIC20.77■□□□□ 0.92
BCAT1P54687 FAM197Y4-202ENST00000622692 608 ntBASIC20.77■□□□□ 0.92
BCAT1P54687 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
BCAT1P54687 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC20.77■□□□□ 0.92
BCAT1P54687 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC20.77■□□□□ 0.92
BCAT1P54687 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
BCAT1P54687 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
BCAT1P54687 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
BCAT1P54687 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
BCAT1P54687 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC20.76■□□□□ 0.91
BCAT1P54687 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
BCAT1P54687 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC20.76■□□□□ 0.91
BCAT1P54687 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
BCAT1P54687 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC20.76■□□□□ 0.91
BCAT1P54687 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
BCAT1P54687 F2R-202ENST00000505600 442 ntTSL 2 BASIC20.76■□□□□ 0.91
BCAT1P54687 DET1-205ENST00000558413 583 ntTSL 4 BASIC20.76■□□□□ 0.91
BCAT1P54687 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC20.76■□□□□ 0.91
BCAT1P54687 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC20.76■□□□□ 0.91
BCAT1P54687 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
BCAT1P54687 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
BCAT1P54687 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
BCAT1P54687 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC20.76■□□□□ 0.91
BCAT1P54687 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC20.75■□□□□ 0.91
BCAT1P54687 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
BCAT1P54687 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
BCAT1P54687 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
BCAT1P54687 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
BCAT1P54687 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
BCAT1P54687 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
BCAT1P54687 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
BCAT1P54687 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
BCAT1P54687 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC20.75■□□□□ 0.91
BCAT1P54687 AL158047.1-201ENST00000445918 881 ntBASIC20.75■□□□□ 0.91
BCAT1P54687 AC093827.2-201ENST00000512654 315 ntBASIC20.75■□□□□ 0.91
BCAT1P54687 AC004264.1-201ENST00000608354 794 ntBASIC20.75■□□□□ 0.91
BCAT1P54687 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC20.75■□□□□ 0.91
BCAT1P54687 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC20.75■□□□□ 0.91
BCAT1P54687 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
BCAT1P54687 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
BCAT1P54687 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
BCAT1P54687 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC20.74■□□□□ 0.91
BCAT1P54687 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
BCAT1P54687 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
BCAT1P54687 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC20.74■□□□□ 0.91
BCAT1P54687 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
BCAT1P54687 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
BCAT1P54687 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
BCAT1P54687 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
BCAT1P54687 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
BCAT1P54687 KRT18P16-201ENST00000510337 1294 ntBASIC20.74■□□□□ 0.91
BCAT1P54687 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC20.74■□□□□ 0.91
BCAT1P54687 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC20.74■□□□□ 0.91
BCAT1P54687 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC20.74■□□□□ 0.91
BCAT1P54687 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC20.74■□□□□ 0.91
BCAT1P54687 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
BCAT1P54687 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC20.74■□□□□ 0.91
BCAT1P54687 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
BCAT1P54687 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
BCAT1P54687 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC20.74■□□□□ 0.91
BCAT1P54687 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC20.74■□□□□ 0.91
BCAT1P54687 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
BCAT1P54687 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC20.74■□□□□ 0.91
BCAT1P54687 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
BCAT1P54687 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
BCAT1P54687 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
BCAT1P54687 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC20.73■□□□□ 0.91
BCAT1P54687 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
BCAT1P54687 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
BCAT1P54687 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
BCAT1P54687 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
BCAT1P54687 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
BCAT1P54687 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
BCAT1P54687 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
BCAT1P54687 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
BCAT1P54687 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
BCAT1P54687 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
BCAT1P54687 KRT16P5-201ENST00000455284 522 ntBASIC20.73■□□□□ 0.91
BCAT1P54687 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC20.73■□□□□ 0.91
BCAT1P54687 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC20.73■□□□□ 0.91
BCAT1P54687 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC20.73■□□□□ 0.91
BCAT1P54687 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC20.73■□□□□ 0.91
BCAT1P54687 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC20.73■□□□□ 0.91
BCAT1P54687 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC20.73■□□□□ 0.91
BCAT1P54687 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
BCAT1P54687 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC20.73■□□□□ 0.91
BCAT1P54687 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
BCAT1P54687 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
BCAT1P54687 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
BCAT1P54687 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC20.73■□□□□ 0.91
BCAT1P54687 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
BCAT1P54687 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC20.72■□□□□ 0.91
BCAT1P54687 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
BCAT1P54687 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
BCAT1P54687 ADM-207ENST00000530439 1839 ntTSL 2 BASIC20.72■□□□□ 0.91
BCAT1P54687 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
BCAT1P54687 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms