Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
PCP4P48539 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
PCP4P48539 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
PCP4P48539 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
PCP4P48539 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
PCP4P48539 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
PCP4P48539 SLC9A3P3-201ENST00000457608 2229 ntBASIC13.66□□□□□ -0.22
PCP4P48539 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC13.66□□□□□ -0.22
PCP4P48539 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
PCP4P48539 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC13.66□□□□□ -0.22
PCP4P48539 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
PCP4P48539 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
PCP4P48539 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
PCP4P48539 STK24-203ENST00000397517 4578 ntTSL 2 BASIC13.65□□□□□ -0.22
PCP4P48539 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC13.65□□□□□ -0.22
PCP4P48539 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
PCP4P48539 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
PCP4P48539 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
PCP4P48539 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC13.65□□□□□ -0.22
PCP4P48539 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC13.65□□□□□ -0.22
PCP4P48539 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC13.65□□□□□ -0.22
PCP4P48539 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
PCP4P48539 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
PCP4P48539 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
PCP4P48539 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
PCP4P48539 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
PCP4P48539 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
PCP4P48539 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
PCP4P48539 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
PCP4P48539 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
PCP4P48539 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.23
PCP4P48539 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
PCP4P48539 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC13.64□□□□□ -0.23
PCP4P48539 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC13.64□□□□□ -0.23
PCP4P48539 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC13.64□□□□□ -0.23
PCP4P48539 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
PCP4P48539 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
PCP4P48539 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
PCP4P48539 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
PCP4P48539 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC13.64□□□□□ -0.23
PCP4P48539 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
PCP4P48539 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC13.64□□□□□ -0.23
PCP4P48539 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
PCP4P48539 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
PCP4P48539 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
PCP4P48539 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
PCP4P48539 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
PCP4P48539 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
PCP4P48539 UBALD1-205ENST00000590891 2641 ntBASIC13.64□□□□□ -0.23
PCP4P48539 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
PCP4P48539 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
PCP4P48539 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
PCP4P48539 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
PCP4P48539 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
PCP4P48539 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
PCP4P48539 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
PCP4P48539 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC13.64□□□□□ -0.23
PCP4P48539 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
PCP4P48539 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
PCP4P48539 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC13.63□□□□□ -0.23
PCP4P48539 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC13.63□□□□□ -0.23
PCP4P48539 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
PCP4P48539 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC13.63□□□□□ -0.23
PCP4P48539 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
PCP4P48539 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
PCP4P48539 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC13.63□□□□□ -0.23
PCP4P48539 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
PCP4P48539 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
PCP4P48539 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC13.63□□□□□ -0.23
PCP4P48539 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
PCP4P48539 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
PCP4P48539 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC13.63□□□□□ -0.23
PCP4P48539 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
PCP4P48539 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
PCP4P48539 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
PCP4P48539 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
PCP4P48539 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
PCP4P48539 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
PCP4P48539 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
PCP4P48539 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
PCP4P48539 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC13.63□□□□□ -0.23
PCP4P48539 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
PCP4P48539 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
PCP4P48539 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
PCP4P48539 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
PCP4P48539 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC13.63□□□□□ -0.23
PCP4P48539 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
PCP4P48539 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
PCP4P48539 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
PCP4P48539 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
PCP4P48539 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC13.62□□□□□ -0.23
PCP4P48539 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
PCP4P48539 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
PCP4P48539 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
PCP4P48539 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
PCP4P48539 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
PCP4P48539 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
PCP4P48539 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC13.62□□□□□ -0.23
PCP4P48539 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
PCP4P48539 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC13.62□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms