Protein–RNA interactions for Protein: P48443

RXRG, Retinoic acid receptor RXR-gamma, humanhuman

Predictions only

Length 463 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRGP48443 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RXRGP48443 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RXRGP48443 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
RXRGP48443 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
RXRGP48443 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC19.68■□□□□ 0.74
RXRGP48443 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.68■□□□□ 0.74
RXRGP48443 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
RXRGP48443 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC19.68■□□□□ 0.74
RXRGP48443 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RXRGP48443 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
RXRGP48443 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RXRGP48443 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
RXRGP48443 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
RXRGP48443 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
RXRGP48443 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
RXRGP48443 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RXRGP48443 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC19.67■□□□□ 0.74
RXRGP48443 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RXRGP48443 AL355355.2-201ENST00000442321 338 ntBASIC19.67■□□□□ 0.74
RXRGP48443 KRT18P21-201ENST00000515767 1272 ntBASIC19.67■□□□□ 0.74
RXRGP48443 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RXRGP48443 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC19.67■□□□□ 0.74
RXRGP48443 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC19.67■□□□□ 0.74
RXRGP48443 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
RXRGP48443 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
RXRGP48443 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC19.67■□□□□ 0.74
RXRGP48443 AC010331.1-201ENST00000611423 582 ntBASIC19.67■□□□□ 0.74
RXRGP48443 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RXRGP48443 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
RXRGP48443 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
RXRGP48443 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RXRGP48443 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RXRGP48443 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC19.66■□□□□ 0.74
RXRGP48443 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RXRGP48443 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RXRGP48443 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RXRGP48443 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RXRGP48443 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
RXRGP48443 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RXRGP48443 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RXRGP48443 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
RXRGP48443 CD177P1-201ENST00000606252 935 ntBASIC19.66■□□□□ 0.74
RXRGP48443 AC073195.1-201ENST00000607241 877 ntBASIC19.66■□□□□ 0.74
RXRGP48443 AL353708.3-201ENST00000610272 989 ntBASIC19.66■□□□□ 0.74
RXRGP48443 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC19.66■□□□□ 0.74
RXRGP48443 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
RXRGP48443 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RXRGP48443 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
RXRGP48443 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
RXRGP48443 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RXRGP48443 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
RXRGP48443 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC19.65■□□□□ 0.74
RXRGP48443 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC19.65■□□□□ 0.74
RXRGP48443 AL157384.1-201ENST00000445995 2473 ntBASIC19.65■□□□□ 0.74
RXRGP48443 AC124283.5-201ENST00000624661 1809 ntBASIC19.65■□□□□ 0.74
RXRGP48443 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
RXRGP48443 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
RXRGP48443 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RXRGP48443 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC19.65■□□□□ 0.74
RXRGP48443 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC19.65■□□□□ 0.74
RXRGP48443 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC19.65■□□□□ 0.74
RXRGP48443 SRI-203ENST00000419179 1307 ntTSL 2 BASIC19.65■□□□□ 0.74
RXRGP48443 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC19.65■□□□□ 0.74
RXRGP48443 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RXRGP48443 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
RXRGP48443 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RXRGP48443 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RXRGP48443 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
RXRGP48443 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19.65■□□□□ 0.74
RXRGP48443 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC19.65■□□□□ 0.74
RXRGP48443 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RXRGP48443 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC19.65■□□□□ 0.74
RXRGP48443 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
RXRGP48443 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
RXRGP48443 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
RXRGP48443 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
RXRGP48443 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
RXRGP48443 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RXRGP48443 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC19.64■□□□□ 0.73
RXRGP48443 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RXRGP48443 PNN-205ENST00000556530 601 ntTSL 2 BASIC19.64■□□□□ 0.73
RXRGP48443 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC19.64■□□□□ 0.73
RXRGP48443 AC004264.1-201ENST00000608354 794 ntBASIC19.64■□□□□ 0.73
RXRGP48443 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC19.64■□□□□ 0.73
RXRGP48443 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RXRGP48443 FEM1AP1-201ENST00000431297 1995 ntBASIC19.64■□□□□ 0.73
RXRGP48443 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RXRGP48443 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
RXRGP48443 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
RXRGP48443 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RXRGP48443 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RXRGP48443 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.63■□□□□ 0.73
RXRGP48443 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RXRGP48443 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC19.63■□□□□ 0.73
RXRGP48443 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC19.63■□□□□ 0.73
RXRGP48443 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RXRGP48443 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
RXRGP48443 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
RXRGP48443 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC19.63■□□□□ 0.73
RXRGP48443 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms