Protein–RNA interactions for Protein: P36406

TRIM23, E3 ubiquitin-protein ligase TRIM23, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23P36406 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC19.4■□□□□ 0.7
TRIM23P36406 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRIM23P36406 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC19.4■□□□□ 0.7
TRIM23P36406 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRIM23P36406 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRIM23P36406 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRIM23P36406 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRIM23P36406 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRIM23P36406 AC009237.14-201ENST00000609975 1594 ntBASIC19.4■□□□□ 0.7
TRIM23P36406 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
TRIM23P36406 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TRIM23P36406 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.7
TRIM23P36406 AL391422.3-201ENST00000603791 2761 ntBASIC19.39■□□□□ 0.7
TRIM23P36406 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC19.39■□□□□ 0.69
TRIM23P36406 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC19.39■□□□□ 0.69
TRIM23P36406 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRIM23P36406 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRIM23P36406 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRIM23P36406 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRIM23P36406 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC19.39■□□□□ 0.69
TRIM23P36406 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRIM23P36406 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
TRIM23P36406 AL355355.2-201ENST00000442321 338 ntBASIC19.39■□□□□ 0.69
TRIM23P36406 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TRIM23P36406 NUDT16P1-203ENST00000513809 620 ntBASIC19.39■□□□□ 0.69
TRIM23P36406 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC19.39■□□□□ 0.69
TRIM23P36406 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC19.39■□□□□ 0.69
TRIM23P36406 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC19.39■□□□□ 0.69
TRIM23P36406 AL445675.2-201ENST00000620291 557 ntBASIC19.39■□□□□ 0.69
TRIM23P36406 AC073912.3-201ENST00000624414 853 ntBASIC19.39■□□□□ 0.69
TRIM23P36406 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRIM23P36406 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TRIM23P36406 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC19.39■□□□□ 0.69
TRIM23P36406 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TRIM23P36406 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRIM23P36406 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC19.39■□□□□ 0.69
TRIM23P36406 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRIM23P36406 AC099778.1-201ENST00000568593 1911 ntBASIC19.39■□□□□ 0.69
TRIM23P36406 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRIM23P36406 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRIM23P36406 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TRIM23P36406 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRIM23P36406 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
TRIM23P36406 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRIM23P36406 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
TRIM23P36406 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRIM23P36406 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRIM23P36406 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TRIM23P36406 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRIM23P36406 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC19.38■□□□□ 0.69
TRIM23P36406 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC19.38■□□□□ 0.69
TRIM23P36406 KRT16P1-201ENST00000399124 1418 ntBASIC19.38■□□□□ 0.69
TRIM23P36406 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC19.38■□□□□ 0.69
TRIM23P36406 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC19.38■□□□□ 0.69
TRIM23P36406 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
TRIM23P36406 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
TRIM23P36406 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
TRIM23P36406 BX088651.1-201ENST00000540551 451 ntBASIC19.38■□□□□ 0.69
TRIM23P36406 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TRIM23P36406 AL355075.4-201ENST00000554988 638 ntBASIC19.38■□□□□ 0.69
TRIM23P36406 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC19.38■□□□□ 0.69
TRIM23P36406 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC19.38■□□□□ 0.69
TRIM23P36406 CR392000.1-201ENST00000624770 1228 ntBASIC19.38■□□□□ 0.69
TRIM23P36406 MED17-221ENST00000639724 2317 ntTSL 5 BASIC19.38■□□□□ 0.69
TRIM23P36406 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRIM23P36406 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRIM23P36406 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRIM23P36406 AL157384.1-201ENST00000445995 2473 ntBASIC19.37■□□□□ 0.69
TRIM23P36406 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC19.37■□□□□ 0.69
TRIM23P36406 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
TRIM23P36406 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRIM23P36406 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
TRIM23P36406 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TRIM23P36406 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRIM23P36406 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRIM23P36406 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
TRIM23P36406 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRIM23P36406 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TRIM23P36406 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC19.37■□□□□ 0.69
TRIM23P36406 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC19.37■□□□□ 0.69
TRIM23P36406 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC19.37■□□□□ 0.69
TRIM23P36406 TSPY15P-201ENST00000457163 923 ntBASIC19.37■□□□□ 0.69
TRIM23P36406 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC19.37■□□□□ 0.69
TRIM23P36406 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC19.37■□□□□ 0.69
TRIM23P36406 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
TRIM23P36406 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TRIM23P36406 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
TRIM23P36406 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
TRIM23P36406 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC19.37■□□□□ 0.69
TRIM23P36406 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
TRIM23P36406 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC19.36■□□□□ 0.69
TRIM23P36406 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC19.36■□□□□ 0.69
TRIM23P36406 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC19.36■□□□□ 0.69
TRIM23P36406 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC19.36■□□□□ 0.69
TRIM23P36406 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TRIM23P36406 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRIM23P36406 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC19.36■□□□□ 0.69
TRIM23P36406 AC116562.2-201ENST00000507042 360 ntBASIC19.36■□□□□ 0.69
TRIM23P36406 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC19.36■□□□□ 0.69
TRIM23P36406 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms