Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC24.35■■□□□ 1.49
PDE6BP35913 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC24.35■■□□□ 1.49
PDE6BP35913 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC24.35■■□□□ 1.49
PDE6BP35913 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC24.35■■□□□ 1.49
PDE6BP35913 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC24.35■■□□□ 1.49
PDE6BP35913 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
PDE6BP35913 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC24.35■■□□□ 1.49
PDE6BP35913 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC24.35■■□□□ 1.49
PDE6BP35913 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC24.35■■□□□ 1.49
PDE6BP35913 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC24.35■■□□□ 1.49
PDE6BP35913 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC24.35■■□□□ 1.49
PDE6BP35913 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
PDE6BP35913 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
PDE6BP35913 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC24.35■■□□□ 1.49
PDE6BP35913 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC24.35■■□□□ 1.49
PDE6BP35913 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC24.35■■□□□ 1.49
PDE6BP35913 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC24.35■■□□□ 1.49
PDE6BP35913 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
PDE6BP35913 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC24.34■■□□□ 1.49
PDE6BP35913 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
PDE6BP35913 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
PDE6BP35913 DERL1-203ENST00000419562 918 ntTSL 2 BASIC24.34■■□□□ 1.49
PDE6BP35913 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
PDE6BP35913 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC24.34■■□□□ 1.49
PDE6BP35913 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC24.34■■□□□ 1.49
PDE6BP35913 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC24.34■■□□□ 1.49
PDE6BP35913 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
PDE6BP35913 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC24.34■■□□□ 1.49
PDE6BP35913 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC24.33■■□□□ 1.49
PDE6BP35913 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
PDE6BP35913 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
PDE6BP35913 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC24.33■■□□□ 1.49
PDE6BP35913 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
PDE6BP35913 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
PDE6BP35913 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
PDE6BP35913 Z85996.1-201ENST00000494644 937 ntBASIC24.33■■□□□ 1.49
PDE6BP35913 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
PDE6BP35913 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC24.33■■□□□ 1.49
PDE6BP35913 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC24.33■■□□□ 1.49
PDE6BP35913 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC24.33■■□□□ 1.48
PDE6BP35913 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC24.32■■□□□ 1.48
PDE6BP35913 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC24.32■■□□□ 1.48
PDE6BP35913 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
PDE6BP35913 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
PDE6BP35913 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
PDE6BP35913 IPPK-202ENST00000375522 882 ntTSL 3 BASIC24.32■■□□□ 1.48
PDE6BP35913 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
PDE6BP35913 AL671277.2-201ENST00000458060 996 ntBASIC24.32■■□□□ 1.48
PDE6BP35913 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC24.32■■□□□ 1.48
PDE6BP35913 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC24.32■■□□□ 1.48
PDE6BP35913 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC24.32■■□□□ 1.48
PDE6BP35913 AC140113.3-201ENST00000605663 199 ntBASIC24.32■■□□□ 1.48
PDE6BP35913 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
PDE6BP35913 AC093458.2-201ENST00000623150 629 ntBASIC24.32■■□□□ 1.48
PDE6BP35913 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
PDE6BP35913 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC24.32■■□□□ 1.48
PDE6BP35913 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
PDE6BP35913 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC24.31■■□□□ 1.48
PDE6BP35913 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
PDE6BP35913 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
PDE6BP35913 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC24.31■■□□□ 1.48
PDE6BP35913 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC24.31■■□□□ 1.48
PDE6BP35913 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
PDE6BP35913 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
PDE6BP35913 DUSP5P1-201ENST00000441325 1139 ntBASIC24.31■■□□□ 1.48
PDE6BP35913 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC24.31■■□□□ 1.48
PDE6BP35913 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC24.31■■□□□ 1.48
PDE6BP35913 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC24.31■■□□□ 1.48
PDE6BP35913 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
PDE6BP35913 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
PDE6BP35913 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
PDE6BP35913 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC24.3■■□□□ 1.48
PDE6BP35913 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC24.3■■□□□ 1.48
PDE6BP35913 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
PDE6BP35913 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
PDE6BP35913 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC24.3■■□□□ 1.48
PDE6BP35913 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC24.3■■□□□ 1.48
PDE6BP35913 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC24.3■■□□□ 1.48
PDE6BP35913 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
PDE6BP35913 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC24.3■■□□□ 1.48
PDE6BP35913 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
PDE6BP35913 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
PDE6BP35913 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC24.3■■□□□ 1.48
PDE6BP35913 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC24.3■■□□□ 1.48
PDE6BP35913 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC24.3■■□□□ 1.48
PDE6BP35913 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
PDE6BP35913 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC24.3■■□□□ 1.48
PDE6BP35913 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC24.3■■□□□ 1.48
PDE6BP35913 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
PDE6BP35913 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
PDE6BP35913 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC24.29■■□□□ 1.48
PDE6BP35913 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
PDE6BP35913 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC24.29■■□□□ 1.48
PDE6BP35913 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
PDE6BP35913 AL450487.1-201ENST00000426799 995 ntBASIC24.29■■□□□ 1.48
PDE6BP35913 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
PDE6BP35913 CA15P1-201ENST00000481698 905 ntBASIC24.29■■□□□ 1.48
PDE6BP35913 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC24.29■■□□□ 1.48
PDE6BP35913 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC24.29■■□□□ 1.48
PDE6BP35913 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC24.29■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms