Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CLCN1P35523 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CLCN1P35523 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC22.31■■□□□ 1.16
CLCN1P35523 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC22.31■■□□□ 1.16
CLCN1P35523 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC22.31■■□□□ 1.16
CLCN1P35523 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
CLCN1P35523 AC104187.1-201ENST00000607510 612 ntBASIC22.31■■□□□ 1.16
CLCN1P35523 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC22.31■■□□□ 1.16
CLCN1P35523 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC22.31■■□□□ 1.16
CLCN1P35523 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
CLCN1P35523 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
CLCN1P35523 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CLCN1P35523 TNRC18P3-201ENST00000441896 2691 ntBASIC22.31■■□□□ 1.16
CLCN1P35523 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC22.31■■□□□ 1.16
CLCN1P35523 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC22.31■■□□□ 1.16
CLCN1P35523 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC22.3■■□□□ 1.16
CLCN1P35523 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
CLCN1P35523 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC22.3■■□□□ 1.16
CLCN1P35523 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC22.3■■□□□ 1.16
CLCN1P35523 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC22.3■■□□□ 1.16
CLCN1P35523 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CLCN1P35523 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CLCN1P35523 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CLCN1P35523 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC22.3■■□□□ 1.16
CLCN1P35523 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
CLCN1P35523 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
CLCN1P35523 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
CLCN1P35523 NAA20-201ENST00000310450 920 ntTSL 2 BASIC22.3■■□□□ 1.16
CLCN1P35523 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC22.3■■□□□ 1.16
CLCN1P35523 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
CLCN1P35523 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC22.3■■□□□ 1.16
CLCN1P35523 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC22.3■■□□□ 1.16
CLCN1P35523 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC22.3■■□□□ 1.16
CLCN1P35523 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC22.3■■□□□ 1.16
CLCN1P35523 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
CLCN1P35523 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
CLCN1P35523 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CLCN1P35523 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC22.3■■□□□ 1.16
CLCN1P35523 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC22.3■■□□□ 1.16
CLCN1P35523 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
CLCN1P35523 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CLCN1P35523 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC22.29■■□□□ 1.16
CLCN1P35523 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
CLCN1P35523 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CLCN1P35523 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC22.29■■□□□ 1.16
CLCN1P35523 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CLCN1P35523 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC22.29■■□□□ 1.16
CLCN1P35523 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CLCN1P35523 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
CLCN1P35523 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
CLCN1P35523 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
CLCN1P35523 AC010141.2-201ENST00000452426 721 ntBASIC22.29■■□□□ 1.16
CLCN1P35523 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC22.29■■□□□ 1.16
CLCN1P35523 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC22.29■■□□□ 1.16
CLCN1P35523 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC22.29■■□□□ 1.16
CLCN1P35523 KRT18P61-201ENST00000585825 1298 ntBASIC22.29■■□□□ 1.16
CLCN1P35523 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC22.29■■□□□ 1.16
CLCN1P35523 AC008175.2-201ENST00000612840 297 ntBASIC22.29■■□□□ 1.16
CLCN1P35523 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC22.29■■□□□ 1.16
CLCN1P35523 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC22.29■■□□□ 1.16
CLCN1P35523 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
CLCN1P35523 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
CLCN1P35523 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
CLCN1P35523 AC004854.2-201ENST00000608450 1441 ntBASIC22.29■■□□□ 1.16
CLCN1P35523 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC22.29■■□□□ 1.16
CLCN1P35523 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC22.29■■□□□ 1.16
CLCN1P35523 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC22.29■■□□□ 1.16
CLCN1P35523 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CLCN1P35523 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC22.29■■□□□ 1.16
CLCN1P35523 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
CLCN1P35523 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CLCN1P35523 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC22.29■■□□□ 1.16
CLCN1P35523 BICD1-207ENST00000551848 1962 ntBASIC22.29■■□□□ 1.16
CLCN1P35523 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
CLCN1P35523 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CLCN1P35523 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
CLCN1P35523 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CLCN1P35523 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CLCN1P35523 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CLCN1P35523 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
CLCN1P35523 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
CLCN1P35523 COX20-201ENST00000366528 568 ntTSL 2 BASIC22.28■■□□□ 1.16
CLCN1P35523 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC22.28■■□□□ 1.16
CLCN1P35523 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC22.28■■□□□ 1.16
CLCN1P35523 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CLCN1P35523 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC22.28■■□□□ 1.16
CLCN1P35523 POU5F1P4-201ENST00000413175 1085 ntBASIC22.28■■□□□ 1.16
CLCN1P35523 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC22.28■■□□□ 1.16
CLCN1P35523 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC22.28■■□□□ 1.16
CLCN1P35523 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC22.28■■□□□ 1.16
CLCN1P35523 AC009053.2-201ENST00000563701 2365 ntBASIC22.28■■□□□ 1.16
CLCN1P35523 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC22.28■■□□□ 1.16
CLCN1P35523 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
CLCN1P35523 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC22.28■■□□□ 1.16
CLCN1P35523 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
CLCN1P35523 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CLCN1P35523 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CLCN1P35523 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CLCN1P35523 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
CLCN1P35523 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC22.27■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms