Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
MMP8P22894 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
MMP8P22894 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
MMP8P22894 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
MMP8P22894 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
MMP8P22894 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
MMP8P22894 GAS7-202ENST00000396115 929 ntTSL 5 BASIC20.71■□□□□ 0.91
MMP8P22894 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC20.71■□□□□ 0.91
MMP8P22894 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC20.71■□□□□ 0.91
MMP8P22894 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC20.71■□□□□ 0.91
MMP8P22894 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC20.71■□□□□ 0.91
MMP8P22894 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC20.71■□□□□ 0.91
MMP8P22894 AC008403.3-201ENST00000598924 454 ntBASIC20.71■□□□□ 0.91
MMP8P22894 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
MMP8P22894 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
MMP8P22894 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC20.71■□□□□ 0.91
MMP8P22894 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC20.71■□□□□ 0.91
MMP8P22894 TP73-202ENST00000354437 2140 ntTSL 5 BASIC20.71■□□□□ 0.91
MMP8P22894 AC007952.6-201ENST00000573168 2673 ntBASIC20.71■□□□□ 0.91
MMP8P22894 AC003957.1-201ENST00000625108 2673 ntBASIC20.71■□□□□ 0.91
MMP8P22894 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC20.7■□□□□ 0.91
MMP8P22894 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC20.7■□□□□ 0.9
MMP8P22894 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC20.7■□□□□ 0.9
MMP8P22894 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
MMP8P22894 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
MMP8P22894 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
MMP8P22894 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
MMP8P22894 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
MMP8P22894 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
MMP8P22894 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
MMP8P22894 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC20.7■□□□□ 0.9
MMP8P22894 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC20.7■□□□□ 0.9
MMP8P22894 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
MMP8P22894 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
MMP8P22894 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
MMP8P22894 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC20.7■□□□□ 0.9
MMP8P22894 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
MMP8P22894 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
MMP8P22894 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC20.7■□□□□ 0.9
MMP8P22894 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
MMP8P22894 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC20.7■□□□□ 0.9
MMP8P22894 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
MMP8P22894 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
MMP8P22894 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
MMP8P22894 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
MMP8P22894 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC20.69■□□□□ 0.9
MMP8P22894 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC20.69■□□□□ 0.9
MMP8P22894 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
MMP8P22894 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
MMP8P22894 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
MMP8P22894 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
MMP8P22894 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
MMP8P22894 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
MMP8P22894 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC20.69■□□□□ 0.9
MMP8P22894 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
MMP8P22894 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.69■□□□□ 0.9
MMP8P22894 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
MMP8P22894 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
MMP8P22894 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
MMP8P22894 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC20.69■□□□□ 0.9
MMP8P22894 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
MMP8P22894 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC20.69■□□□□ 0.9
MMP8P22894 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
MMP8P22894 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
MMP8P22894 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
MMP8P22894 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
MMP8P22894 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
MMP8P22894 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
MMP8P22894 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
MMP8P22894 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
MMP8P22894 AC005332.7-201ENST00000614046 2005 ntBASIC20.68■□□□□ 0.9
MMP8P22894 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
MMP8P22894 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC20.68■□□□□ 0.9
MMP8P22894 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
MMP8P22894 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
MMP8P22894 POM121L13P-201ENST00000422362 380 ntBASIC20.68■□□□□ 0.9
MMP8P22894 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC20.68■□□□□ 0.9
MMP8P22894 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC20.68■□□□□ 0.9
MMP8P22894 RNA5SP413-201ENST00000516373 109 ntBASIC20.68■□□□□ 0.9
MMP8P22894 PNN-205ENST00000556530 601 ntTSL 2 BASIC20.68■□□□□ 0.9
MMP8P22894 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
MMP8P22894 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC20.68■□□□□ 0.9
MMP8P22894 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
MMP8P22894 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC20.68■□□□□ 0.9
MMP8P22894 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC20.68■□□□□ 0.9
MMP8P22894 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.68■□□□□ 0.9
MMP8P22894 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
MMP8P22894 AP006587.1-201ENST00000534129 1502 ntBASIC20.68■□□□□ 0.9
MMP8P22894 GOLGA6L3-201ENST00000507199 1679 ntBASIC20.67■□□□□ 0.9
MMP8P22894 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
MMP8P22894 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
MMP8P22894 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
MMP8P22894 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
MMP8P22894 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC20.67■□□□□ 0.9
MMP8P22894 Z82202.1-201ENST00000623446 1880 ntBASIC20.67■□□□□ 0.9
MMP8P22894 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
MMP8P22894 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
MMP8P22894 TREX2-204ENST00000370212 861 ntTSL 5 BASIC20.67■□□□□ 0.9
MMP8P22894 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
MMP8P22894 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC20.67■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms