Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 KRT8P17-201ENST00000453110 1448 ntBASIC19.24■□□□□ 0.67
CDH3P22223 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CDH3P22223 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDH3P22223 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC19.24■□□□□ 0.67
CDH3P22223 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDH3P22223 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.23■□□□□ 0.67
CDH3P22223 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CDH3P22223 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDH3P22223 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDH3P22223 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDH3P22223 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDH3P22223 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC19.23■□□□□ 0.67
CDH3P22223 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDH3P22223 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC19.23■□□□□ 0.67
CDH3P22223 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC19.23■□□□□ 0.67
CDH3P22223 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC19.23■□□□□ 0.67
CDH3P22223 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDH3P22223 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC19.23■□□□□ 0.67
CDH3P22223 PRKY-204ENST00000533551 1019 ntBASIC19.23■□□□□ 0.67
CDH3P22223 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDH3P22223 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
CDH3P22223 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC19.23■□□□□ 0.67
CDH3P22223 AL023875.1-201ENST00000640777 796 ntBASIC19.23■□□□□ 0.67
CDH3P22223 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC19.23■□□□□ 0.67
CDH3P22223 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC19.23■□□□□ 0.67
CDH3P22223 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CDH3P22223 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CDH3P22223 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDH3P22223 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDH3P22223 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC19.23■□□□□ 0.67
CDH3P22223 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
CDH3P22223 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CDH3P22223 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CDH3P22223 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDH3P22223 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
CDH3P22223 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDH3P22223 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CDH3P22223 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDH3P22223 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDH3P22223 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CDH3P22223 AC239809.2-201ENST00000415381 517 ntBASIC19.22■□□□□ 0.67
CDH3P22223 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC19.22■□□□□ 0.67
CDH3P22223 UBE2SP1-201ENST00000450587 669 ntBASIC19.22■□□□□ 0.67
CDH3P22223 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC19.22■□□□□ 0.67
CDH3P22223 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC19.22■□□□□ 0.67
CDH3P22223 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC19.22■□□□□ 0.67
CDH3P22223 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDH3P22223 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDH3P22223 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC19.22■□□□□ 0.67
CDH3P22223 AC124283.5-201ENST00000624661 1809 ntBASIC19.22■□□□□ 0.67
CDH3P22223 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC19.22■□□□□ 0.67
CDH3P22223 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
CDH3P22223 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC19.22■□□□□ 0.67
CDH3P22223 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDH3P22223 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC19.22■□□□□ 0.67
CDH3P22223 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC19.22■□□□□ 0.67
CDH3P22223 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CDH3P22223 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDH3P22223 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
CDH3P22223 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
CDH3P22223 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDH3P22223 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDH3P22223 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDH3P22223 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
CDH3P22223 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
CDH3P22223 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDH3P22223 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDH3P22223 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDH3P22223 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDH3P22223 ISG20-202ENST00000379224 540 ntTSL 3 BASIC19.21■□□□□ 0.67
CDH3P22223 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC19.21■□□□□ 0.67
CDH3P22223 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDH3P22223 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC19.21■□□□□ 0.67
CDH3P22223 LY6E-205ENST00000519611 635 ntTSL 3 BASIC19.21■□□□□ 0.67
CDH3P22223 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
CDH3P22223 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC19.21■□□□□ 0.67
CDH3P22223 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC19.21■□□□□ 0.67
CDH3P22223 RHOD-202ENST00000532559 538 ntTSL 3 BASIC19.21■□□□□ 0.67
CDH3P22223 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC19.21■□□□□ 0.67
CDH3P22223 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC19.21■□□□□ 0.67
CDH3P22223 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDH3P22223 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.21■□□□□ 0.67
CDH3P22223 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDH3P22223 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC19.21■□□□□ 0.67
CDH3P22223 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDH3P22223 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.2■□□□□ 0.66
CDH3P22223 LETM1P2-201ENST00000597330 2178 ntBASIC19.2■□□□□ 0.66
CDH3P22223 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDH3P22223 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC19.2■□□□□ 0.66
CDH3P22223 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
CDH3P22223 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CDH3P22223 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDH3P22223 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDH3P22223 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
CDH3P22223 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
CDH3P22223 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC19.2■□□□□ 0.66
CDH3P22223 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC19.2■□□□□ 0.66
CDH3P22223 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC19.2■□□□□ 0.66
CDH3P22223 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC19.2■□□□□ 0.66
CDH3P22223 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms