Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
NFKB1P19838 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
NFKB1P19838 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC20.02■□□□□ 0.8
NFKB1P19838 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC20.02■□□□□ 0.8
NFKB1P19838 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC20.02■□□□□ 0.8
NFKB1P19838 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
NFKB1P19838 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
NFKB1P19838 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
NFKB1P19838 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
NFKB1P19838 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC20.02■□□□□ 0.8
NFKB1P19838 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
NFKB1P19838 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
NFKB1P19838 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.79
NFKB1P19838 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC20.02■□□□□ 0.79
NFKB1P19838 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC20.01■□□□□ 0.79
NFKB1P19838 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC20.01■□□□□ 0.79
NFKB1P19838 AC116562.4-201ENST00000641316 2276 ntBASIC20.01■□□□□ 0.79
NFKB1P19838 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
NFKB1P19838 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC20.01■□□□□ 0.79
NFKB1P19838 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC20.01■□□□□ 0.79
NFKB1P19838 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NFKB1P19838 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NFKB1P19838 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
NFKB1P19838 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
NFKB1P19838 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
NFKB1P19838 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
NFKB1P19838 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC20.01■□□□□ 0.79
NFKB1P19838 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC20.01■□□□□ 0.79
NFKB1P19838 AC120498.8-201ENST00000614275 531 ntBASIC20.01■□□□□ 0.79
NFKB1P19838 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
NFKB1P19838 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC20.01■□□□□ 0.79
NFKB1P19838 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
NFKB1P19838 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
NFKB1P19838 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NFKB1P19838 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
NFKB1P19838 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
NFKB1P19838 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
NFKB1P19838 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC20■□□□□ 0.79
NFKB1P19838 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC20■□□□□ 0.79
NFKB1P19838 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC20■□□□□ 0.79
NFKB1P19838 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC20■□□□□ 0.79
NFKB1P19838 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
NFKB1P19838 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC20■□□□□ 0.79
NFKB1P19838 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NFKB1P19838 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC20■□□□□ 0.79
NFKB1P19838 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC20■□□□□ 0.79
NFKB1P19838 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NFKB1P19838 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC20■□□□□ 0.79
NFKB1P19838 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC20■□□□□ 0.79
NFKB1P19838 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC20■□□□□ 0.79
NFKB1P19838 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NFKB1P19838 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
NFKB1P19838 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NFKB1P19838 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC20■□□□□ 0.79
NFKB1P19838 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC20■□□□□ 0.79
NFKB1P19838 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NFKB1P19838 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
NFKB1P19838 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NFKB1P19838 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
NFKB1P19838 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
NFKB1P19838 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19.99■□□□□ 0.79
NFKB1P19838 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
NFKB1P19838 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.99■□□□□ 0.79
NFKB1P19838 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
NFKB1P19838 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC19.99■□□□□ 0.79
NFKB1P19838 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC19.99■□□□□ 0.79
NFKB1P19838 AC008687.6-201ENST00000596318 630 ntBASIC19.99■□□□□ 0.79
NFKB1P19838 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
NFKB1P19838 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
NFKB1P19838 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
NFKB1P19838 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC19.99■□□□□ 0.79
NFKB1P19838 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.99■□□□□ 0.79
NFKB1P19838 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
NFKB1P19838 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC19.99■□□□□ 0.79
NFKB1P19838 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
NFKB1P19838 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
NFKB1P19838 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
NFKB1P19838 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC19.99■□□□□ 0.79
NFKB1P19838 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
NFKB1P19838 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
NFKB1P19838 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
NFKB1P19838 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
NFKB1P19838 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
NFKB1P19838 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
NFKB1P19838 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
NFKB1P19838 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
NFKB1P19838 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
NFKB1P19838 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC19.98■□□□□ 0.79
NFKB1P19838 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
NFKB1P19838 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC19.98■□□□□ 0.79
NFKB1P19838 UNC93B4-201ENST00000505679 747 ntBASIC19.98■□□□□ 0.79
NFKB1P19838 RNA5SP413-201ENST00000516373 109 ntBASIC19.98■□□□□ 0.79
NFKB1P19838 UNC93B5-201ENST00000530315 699 ntBASIC19.98■□□□□ 0.79
NFKB1P19838 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
NFKB1P19838 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
NFKB1P19838 AL121906.2-201ENST00000621597 723 ntBASIC19.98■□□□□ 0.79
NFKB1P19838 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
NFKB1P19838 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
NFKB1P19838 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
NFKB1P19838 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms