Protein–RNA interactions for Protein: P19013

KRT4, Keratin, type II cytoskeletal 4, humanhuman

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT4P19013 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
KRT4P19013 AC005837.3-201ENST00000612163 286 ntBASIC19.72■□□□□ 0.75
KRT4P19013 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC19.72■□□□□ 0.75
KRT4P19013 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC19.72■□□□□ 0.75
KRT4P19013 MYCNOS-205ENST00000641950 531 ntBASIC19.72■□□□□ 0.75
KRT4P19013 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
KRT4P19013 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
KRT4P19013 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
KRT4P19013 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
KRT4P19013 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
KRT4P19013 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
KRT4P19013 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
KRT4P19013 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
KRT4P19013 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
KRT4P19013 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
KRT4P19013 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
KRT4P19013 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
KRT4P19013 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
KRT4P19013 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
KRT4P19013 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
KRT4P19013 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC19.71■□□□□ 0.75
KRT4P19013 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
KRT4P19013 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC19.71■□□□□ 0.75
KRT4P19013 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
KRT4P19013 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
KRT4P19013 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
KRT4P19013 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
KRT4P19013 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
KRT4P19013 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
KRT4P19013 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
KRT4P19013 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
KRT4P19013 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
KRT4P19013 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
KRT4P19013 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
KRT4P19013 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
KRT4P19013 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
KRT4P19013 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
KRT4P19013 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC19.7■□□□□ 0.74
KRT4P19013 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
KRT4P19013 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
KRT4P19013 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
KRT4P19013 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
KRT4P19013 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
KRT4P19013 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
KRT4P19013 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
KRT4P19013 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
KRT4P19013 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
KRT4P19013 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
KRT4P19013 PARP1-202ENST00000366792 553 ntTSL 3 BASIC19.7■□□□□ 0.74
KRT4P19013 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
KRT4P19013 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
KRT4P19013 TERF1P5-201ENST00000477545 1207 ntBASIC19.7■□□□□ 0.74
KRT4P19013 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
KRT4P19013 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC19.7■□□□□ 0.74
KRT4P19013 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
KRT4P19013 SP2-202ENST00000613139 908 ntTSL 5 BASIC19.7■□□□□ 0.74
KRT4P19013 RAB43-208ENST00000615093 783 ntTSL 5 BASIC19.7■□□□□ 0.74
KRT4P19013 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
KRT4P19013 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
KRT4P19013 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
KRT4P19013 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC19.7■□□□□ 0.74
KRT4P19013 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
KRT4P19013 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
KRT4P19013 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
KRT4P19013 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
KRT4P19013 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC19.69■□□□□ 0.74
KRT4P19013 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
KRT4P19013 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
KRT4P19013 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC19.69■□□□□ 0.74
KRT4P19013 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC19.69■□□□□ 0.74
KRT4P19013 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
KRT4P19013 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
KRT4P19013 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
KRT4P19013 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
KRT4P19013 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC19.69■□□□□ 0.74
KRT4P19013 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
KRT4P19013 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
KRT4P19013 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
KRT4P19013 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC19.69■□□□□ 0.74
KRT4P19013 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
KRT4P19013 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
KRT4P19013 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC19.68■□□□□ 0.74
KRT4P19013 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC19.68■□□□□ 0.74
KRT4P19013 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
KRT4P19013 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC19.68■□□□□ 0.74
KRT4P19013 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
KRT4P19013 GALNS-213ENST00000569433 723 ntTSL 3 BASIC19.68■□□□□ 0.74
KRT4P19013 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC19.68■□□□□ 0.74
KRT4P19013 AC016405.3-201ENST00000607710 860 ntBASIC19.68■□□□□ 0.74
KRT4P19013 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
KRT4P19013 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
KRT4P19013 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
KRT4P19013 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
KRT4P19013 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
KRT4P19013 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC19.67■□□□□ 0.74
KRT4P19013 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
KRT4P19013 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
KRT4P19013 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
KRT4P19013 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC19.67■□□□□ 0.74
KRT4P19013 CROCCP3-202ENST00000420820 1947 ntBASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms